RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 Q6ZS46 218 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 C19orf35Q6ZS72 473 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 SLC16A13Q7RTY0 426 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 HSD17B11Q8NBQ5 300 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 GINS3Q9BRX5 216 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 PARD6GQ9BYG4 376 aaPredicted RBP10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 ARV1Q9H2C2 271 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 CLDN34H7C241 214 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 MT-CO2P00403 227 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 CFDP00746 253 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 FGF7P21781 194 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 AKR1C1Q04828 323 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 ZNF680Q8NEM1 530 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 OR2T6Q8NHC8 308 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 GNPNAT1Q96EK6 184 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 WDR61Q9GZS3 305 aaKnown RBP10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 FBXL7Q9UJT9 491 aa10.24□□□□□ -0.77
SHKBP1-209ENST00000595803 IGLV11-55A0A075B6I3 123 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 C17orf112F2Z3M2 114 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 OR2J3O76001 311 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 ATP6V0CP27449 155 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 RAB31Q13636 194 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 GAMTQ14353 236 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 PRR31Q5SQ13 230 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 ACSM6Q6P461 480 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 BTNL8Q6UX41 500 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 ZNF767PQ75MW2 155 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 TMEM144Q7Z5S9 345 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 TAF15Q92804 592 aaKnown RBP eCLIP10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 ACY3Q96HD9 319 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 NOL4LQ96MY1 436 aaPredicted RBP10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 FANCD2OSQ96PS1 177 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 FNDC4Q9H6D8 234 aaPredicted RBP10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 UBQLN2Q9UHD9 624 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 WDR83OSQ9Y284 106 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 DMRT1Q9Y5R6 373 aa10.23□□□□□ -0.77
SHKBP1-209ENST00000595803 FAM181BA6NEQ2 426 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 I3L2K1 104 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 MPDU1O75352 247 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 NDUFB8O95169 186 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 IGHV3-48P01763 117 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 SEC11BP0C7V7 166 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 HILS1P60008 231 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 TEPPQ6URK8 271 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 ALKAL2Q6UX46 152 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 OR2G3Q8NGZ4 309 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 NPIPB3Q92617 1050 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 MS4A10Q96PG2 267 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 SLC25A32Q9H2D1 315 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 ZNF580Q9UK33 172 aa10.22□□□□□ -0.77
SHKBP1-209ENST00000595803 H3BUA1 57 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 SPP1P10451 314 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 PPIFP30405 207 aaKnown RBP10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 MFAP4P55083 255 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 SLC35B1P78383 322 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 KLK9Q2XQG4 91 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 C19orf54Q5BKX5 351 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 SCARB1Q8WTV0 552 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 TMED6Q8WW62 240 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 KLK9Q9UKQ9 250 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 TIMM9Q9Y5J7 89 aa10.21□□□□□ -0.77
SHKBP1-209ENST00000595803 VWFP04275 2813 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 K7EIM0 57 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 TRGV3P03979 118 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 PF4V1P10720 104 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 MDKP21741 143 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 NPBWR1P48145 328 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 CAMLGP49069 296 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 RND2P52198 227 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 RAB14P61106 215 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 RPL15P61313 204 aaKnown RBP10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 RHOGP84095 191 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 RUNX1Q01196 453 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 ATP5G2Q06055 141 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 CENPVQ7Z7K6 275 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 Q8N2B8 174 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 NECAP1Q8NC96 275 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 VN1R17PQ8TDU5 208 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 PSMG3Q9BT73 122 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 RSG1Q9BU20 258 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 SH3BGRL3Q9H299 93 aa10.2□□□□□ -0.78
SHKBP1-209ENST00000595803 TRBV9A0A0B4J1U6 114 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 ZFP92A6NM28 416 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 RGS13O14921 159 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 AGPAT2O15120 278 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 SOX15O60248 233 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 BRI3O95415 125 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 OR10J1P30954 320 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 SERF2P84101 59 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 TMEM95Q3KNT9 176 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 AKR1C8PQ5T2L2 129 aa10.19□□□□□ -0.78
SHKBP1-209ENST00000595803 TMEM116Q8NCL8 245 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 227.2 ms