RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 VN1R17PQ8TDU5 208 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 GALNT14Q96FL9 552 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 SPAG8Q99932 426 aaPredicted RBP10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 PRRT1Q99946 306 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 CSTL1Q9H114 145 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 C11orf68Q9H3H3 251 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 C14orf166Q9Y224 244 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 V9GYH0 126 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 IGHV4-4A0A075B6R2 117 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 A0A0G2JRQ6 117 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 MPTX1A8MV57 137 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 K7EIM0 57 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 ZNF701M0R085 212 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 OR5AC1P0C628 307 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 ZNF114Q8NC26 417 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 OR1P1Q8NH06 330 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 TRIM63Q969Q1 353 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 NAA60Q9H7X0 242 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 GPR132Q9UNW8 380 aa10.02□□□□□ -0.81
SHKBP1-208ENST00000595726 DMBT1Q9UGM3 2413 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 IGHV3-21A0A0B4J1V1 117 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 A0A0B4J293 547 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 CRYM-AS1A6NIL9 109 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 F8W735 103 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 TGOLN2O43493 480 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 ATG12O94817 140 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 ZNF79Q15937 498 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 LHFPL5Q8TAF8 219 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 SCARB1Q8WTV0 552 aa10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 MRPL27Q9P0M9 148 aaKnown RBP10.01□□□□□ -0.81
SHKBP1-208ENST00000595726 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
SHKBP1-208ENST00000595726 OR2T8A6NH00 312 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 C11orf94C9JXX5 98 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 TSPAN4O14817 238 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 ST8SIA3O43173 380 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 CDS2O95674 445 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 S100A5P33763 92 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 KLF9Q13886 244 aaPredicted RBP10□□□□□ -0.81
SHKBP1-208ENST00000595726 SPINK9Q5DT21 86 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 PLET1Q6UQ28 207 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 CCDC190Q86UF4 302 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 POM121L12Q8N7R1 296 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 GLYATL2Q8WU03 294 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 MARC2Q969Z3 335 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 TMEM230Q96A57 120 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 BSCL2Q96G97 398 aaPredicted RBP10□□□□□ -0.81
SHKBP1-208ENST00000595726 ATP6V0BQ99437 205 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 ZNF436Q9C0F3 470 aaPredicted RBP10□□□□□ -0.81
SHKBP1-208ENST00000595726 MCUBQ9NWR8 336 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 SCP2D1Q9UJQ7 156 aa10□□□□□ -0.81
SHKBP1-208ENST00000595726 IGLV2-18A0A075B6J9 118 aa9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 HLA-DMBP28068 263 aa9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 PYDC2Q56P42 97 aa9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 Q6ZTC4 211 aa9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 SLC35G3Q8N808 338 aa9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 RNASE11Q8TAA1 199 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 RRNAD1Q96FB5 475 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-208ENST00000595726 SRRM2Q9UQ35 2752 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 INS-IGF2F8WCM5 200 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 I3L2K1 104 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 IFNA17P01571 189 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 RBMY1A1P0DJD3 496 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 RBMY1CP0DJD4 496 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 FAUP35544 74 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 ERHP84090 104 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 DHODHQ02127 395 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 RBMY1FQ15415 496 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 SPSB3Q6PJ21 355 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 Q6ZRM9 215 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 FAM219AQ8IW50 185 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 SELENOHQ8IZQ5 122 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 TOMM5Q8N4H5 51 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 UBAC2Q8NBM4 344 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 TMEM190Q8WZ59 177 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 MISP3Q96FF7 219 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 CHRDL1Q9BU40 450 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 PDCD10Q9BUL8 212 aa9.98□□□□□ -0.81
SHKBP1-208ENST00000595726 CDK2AP2O75956 126 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 ADMP35318 185 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 ETV6P41212 452 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 HOXA1P49639 335 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 ELLP55199 621 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 AP3S2P59780 193 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 TMEM187Q14656 261 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 LGALS9BQ3B8N2 356 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 Q56UQ5 140 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 TMEM268Q5VZI3 342 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 PVRIGQ6DKI7 326 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 Q8N1X5 172 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 ZNF414Q96IQ9 312 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 SCGB3A2Q96PL1 93 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 SCRT1Q9BWW7 348 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 UFC1Q9Y3C8 167 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms