RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 GPR183P32249 361 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 PVRIGQ6DKI7 326 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 OR1S1Q8NH92 325 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 SCARB1Q8WTV0 552 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 MISP3Q96FF7 219 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 NEURL2Q9BR09 285 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 HIPK2Q9H2X6 1198 aa9.41□□□□□ -0.9
UPF1-203ENST00000594504 HEYLQ9NQ87 328 aaPredicted RBP9.41□□□□□ -0.9
UPF1-203ENST00000594504 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 HYDINQ4G0P3 5121 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 TRAV6A0A075B6T7 132 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 IGHV3-21A0A0B4J1V1 117 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.9
UPF1-203ENST00000594504 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.9
UPF1-203ENST00000594504 I3L2K1 104 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 PITX3O75364 302 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 NXPH3O95157 252 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 HOXB5P09067 269 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.9
UPF1-203ENST00000594504 HTR2BP41595 481 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 IFITM3Q01628 133 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 DEFB114Q30KQ6 69 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 GGNBP1Q5YKI7 109 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 GPHB5Q86YW7 130 aa9.4□□□□□ -0.9
UPF1-203ENST00000594504 BSCL2Q96G97 398 aaPredicted RBP9.4□□□□□ -0.9
UPF1-203ENST00000594504 FAM90A26D6RGX4 464 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 LGALS9O00182 355 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 TGOLN2O43493 480 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 MT-CO2P00403 227 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 IFNA21P01568 189 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 H2AFB2P0C5Z0 115 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 FOLR2P14207 255 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 FCGR2BP31994 310 aaPredicted RBP9.39□□□□□ -0.91
UPF1-203ENST00000594504 MFAP4P55083 255 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 DEFA1P59665 94 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 DEFA3P59666 94 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 GUCA2BQ16661 112 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 FAM106AQ4KMX7 169 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 SPSB3Q6PJ21 355 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 PLET1Q6UQ28 207 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 SLC24A4Q8NFF2 622 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 OR2K2Q8NGT1 345 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 ENKURQ8TC29 256 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 DTD1Q8TEA8 209 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 MITD1Q8WV92 249 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 PINX1Q96BK5 328 aaKnown RBP9.39□□□□□ -0.91
UPF1-203ENST00000594504 WDR89Q96FK6 387 aaPredicted RBP9.39□□□□□ -0.91
UPF1-203ENST00000594504 TXN2Q99757 166 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 RBKSQ9H477 322 aa9.39□□□□□ -0.91
UPF1-203ENST00000594504 EPPK1P58107 5090 aaKnown RBP9.39□□□□□ -0.91
UPF1-203ENST00000594504 OR2T8A6NH00 312 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
UPF1-203ENST00000594504 ADAP1O75689 374 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 C2orf83Q53S99 150 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 Q56UQ5 140 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 NOXA1Q86UR1 476 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 UBAC2Q8NBM4 344 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 OR52B4Q8NGK2 314 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 ZC4H2Q9NQZ6 224 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 U3KQ87 197 aa9.38□□□□□ -0.91
UPF1-203ENST00000594504 OR11H12B2RN74 326 aa9.37□□□□□ -0.91
UPF1-203ENST00000594504 NUPL2O15504 423 aaKnown RBP9.37□□□□□ -0.91
UPF1-203ENST00000594504 MED6O75586 246 aa9.37□□□□□ -0.91
UPF1-203ENST00000594504 NPY1RP25929 384 aa9.37□□□□□ -0.91
UPF1-203ENST00000594504 OPRK1P41145 380 aa9.37□□□□□ -0.91
UPF1-203ENST00000594504 ATP5IP56385 69 aaPredicted RBP9.37□□□□□ -0.91
UPF1-203ENST00000594504 DUSP18Q8NEJ0 188 aa9.37□□□□□ -0.91
UPF1-203ENST00000594504 RNASEH2CQ8TDP1 164 aaKnown RBP9.37□□□□□ -0.91
UPF1-203ENST00000594504 ZNF431Q8TF32 576 aaPredicted RBP9.37□□□□□ -0.91
UPF1-203ENST00000594504 RPS10-NUDT3A0A1W2PQS6 291 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 ZNF320A2RRD8 509 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 A8MWP6 167 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 GNG7O60262 68 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 IFNA10P01566 189 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 IGHV3-48P01763 117 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 CTSGP08311 255 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 CBLN1P23435 193 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 ADMP35318 185 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 NPBWR1P48145 328 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 RELQ04864 619 aaPredicted RBP9.36□□□□□ -0.91
UPF1-203ENST00000594504 NRARPQ7Z6K4 114 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 CIB3Q96Q77 187 aaPredicted RBP9.36□□□□□ -0.91
UPF1-203ENST00000594504 SEC22CQ9BRL7 303 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 CHRDL1Q9BU40 450 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 ZNF436Q9C0F3 470 aaPredicted RBP9.36□□□□□ -0.91
UPF1-203ENST00000594504 FNDC4Q9H6D8 234 aaPredicted RBP9.36□□□□□ -0.91
UPF1-203ENST00000594504 LYSTQ99698 3801 aa9.36□□□□□ -0.91
UPF1-203ENST00000594504 IGHV3-35A0A0C4DH35 117 aa9.35□□□□□ -0.91
UPF1-203ENST00000594504 MPTX1A8MV57 137 aa9.35□□□□□ -0.91
UPF1-203ENST00000594504 NDUFA4O00483 81 aa9.35□□□□□ -0.91
UPF1-203ENST00000594504 SYNGR2O43760 224 aa9.35□□□□□ -0.91
UPF1-203ENST00000594504 IL5P05113 134 aa9.35□□□□□ -0.91
UPF1-203ENST00000594504 ETFRF1Q6IPR1 90 aa9.35□□□□□ -0.91
UPF1-203ENST00000594504 OR4D5Q8NGN0 318 aa9.35□□□□□ -0.91
UPF1-203ENST00000594504 TMEM170AQ8WVE7 144 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms