RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PRRT1Q99946 306 aa10.87□□□□□ -0.67
PNKP-202ENST00000593706 KRTAP17-1Q9BYP8 105 aa10.87□□□□□ -0.67
PNKP-202ENST00000593706 NAA60Q9H7X0 242 aa10.87□□□□□ -0.67
PNKP-202ENST00000593706 AGRNO00468 2067 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 FABP12A6NFH5 140 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 C15orf62A8K5M9 175 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 K7EMT4 169 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 ZNF701M0R085 212 aaPredicted RBP10.86□□□□□ -0.67
PNKP-202ENST00000593706 CTSGP08311 255 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 OR5AC1P0C628 307 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 TFPI2P48307 235 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 AKR1C2P52895 323 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 KLF9Q13886 244 aaPredicted RBP10.86□□□□□ -0.67
PNKP-202ENST00000593706 LGALS9CQ6DKI2 356 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 Q6ZRM9 215 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 TMEM230Q96A57 120 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 FBXL17Q9UF56 701 aa10.86□□□□□ -0.67
PNKP-202ENST00000593706 IGKV3-7A0A075B6H7 116 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 MPTX1A8MV57 137 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 YIF1AO95070 293 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
PNKP-202ENST00000593706 RBMS2Q15434 407 aaKnown RBP10.85□□□□□ -0.67
PNKP-202ENST00000593706 ZNF124Q15973 351 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 TRIM16LQ309B1 348 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 BSXQ3C1V8 233 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 SPINK9Q5DT21 86 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 CCDC190Q86UF4 302 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 GATAD1Q8WUU5 269 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 RNF2Q99496 336 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 RARRES2Q99969 163 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 MFFQ9GZY8 342 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 CSTL1Q9H114 145 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 C14orf166Q9Y224 244 aaKnown RBP10.85□□□□□ -0.67
PNKP-202ENST00000593706 TMEM56-RWDD3S4R434 201 aa10.85□□□□□ -0.67
PNKP-202ENST00000593706 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 IGHV7-4-1A0A0J9YVY3 117 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 TEX13DA0A0J9YY54 714 aaPredicted RBP10.84□□□□□ -0.67
PNKP-202ENST00000593706 NUPL2O15504 423 aaKnown RBP10.84□□□□□ -0.67
PNKP-202ENST00000593706 ATG12O94817 140 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 MT-CO2P00403 227 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 IFNA4P05014 189 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 NANOS2P60321 138 aaKnown RBP10.84□□□□□ -0.67
PNKP-202ENST00000593706 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
PNKP-202ENST00000593706 FAM219AQ8IW50 185 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 SELENOHQ8IZQ5 122 aaKnown RBP10.84□□□□□ -0.67
PNKP-202ENST00000593706 TMEM116Q8NCL8 245 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 C11orf45Q8TAV5 145 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 RBPMSQ93062 196 aaKnown RBP10.84□□□□□ -0.67
PNKP-202ENST00000593706 MISP3Q96FF7 219 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 SMPXQ9UHP9 88 aa10.84□□□□□ -0.67
PNKP-202ENST00000593706 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
PNKP-202ENST00000593706 CCDC160A6NGH7 325 aa10.83□□□□□ -0.68
PNKP-202ENST00000593706 CHEK1O14757 476 aa10.83□□□□□ -0.68
PNKP-202ENST00000593706 RNASE2P10153 161 aaKnown RBP10.83□□□□□ -0.68
PNKP-202ENST00000593706 CMC4P56277 68 aaPredicted RBP10.83□□□□□ -0.68
PNKP-202ENST00000593706 OR11H2Q8NH07 326 aa10.83□□□□□ -0.68
PNKP-202ENST00000593706 RRNAD1Q96FB5 475 aaKnown RBP10.83□□□□□ -0.68
PNKP-202ENST00000593706 TXN2Q99757 166 aa10.83□□□□□ -0.68
PNKP-202ENST00000593706 C11orf68Q9H3H3 251 aaKnown RBP10.83□□□□□ -0.68
PNKP-202ENST00000593706 CA1P00915 261 aaPredicted RBP10.82□□□□□ -0.68
PNKP-202ENST00000593706 IGHV3-48P01763 117 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 ETV6P41212 452 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 ERHP84090 104 aaKnown RBP10.82□□□□□ -0.68
PNKP-202ENST00000593706 DHODHQ02127 395 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 TMEM187Q14656 261 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 GBGT1Q8N5D6 347 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 SLC35G3Q8N808 338 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 OR52E5Q8NH55 327 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 IL22RA2Q969J5 263 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 OR10C1Q96KK4 312 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 SCP2D1Q9UJQ7 156 aa10.82□□□□□ -0.68
PNKP-202ENST00000593706 IGHV3OR16-13A0A075B7E8 117 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 IGHV3-74A0A0B4J1X5 117 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 IFNA17P01571 189 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 MFAP4P55083 255 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 SPCS3P61009 180 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 PAFAH1B2P68402 229 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 TMEM268Q5VZI3 342 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 C2CD4CQ8TF44 421 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 GPR146Q96CH1 333 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 GINS3Q9BRX5 216 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 MCUBQ9NWR8 336 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 PRR13Q9NZ81 148 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 CACNG5Q9UF02 275 aa10.81□□□□□ -0.68
PNKP-202ENST00000593706 GNG7O60262 68 aa10.8□□□□□ -0.68
PNKP-202ENST00000593706 HOXA1P49639 335 aaPredicted RBP10.8□□□□□ -0.68
PNKP-202ENST00000593706 PYDC2Q56P42 97 aa10.8□□□□□ -0.68
PNKP-202ENST00000593706 NMSQ5H8A3 153 aa10.8□□□□□ -0.68
PNKP-202ENST00000593706 TCF24Q7RTU0 167 aa10.8□□□□□ -0.68
PNKP-202ENST00000593706 DEDD2Q8WXF8 326 aa10.8□□□□□ -0.68
PNKP-202ENST00000593706 PINX1Q96BK5 328 aaKnown RBP10.8□□□□□ -0.68
PNKP-202ENST00000593706 FNDC4Q9H6D8 234 aaPredicted RBP10.8□□□□□ -0.68
PNKP-202ENST00000593706 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.8□□□□□ -0.68
PNKP-202ENST00000593706 MRPL36Q9P0J6 103 aaKnown RBP10.8□□□□□ -0.68
PNKP-202ENST00000593706 PKHD1P08F94 4074 aa10.79□□□□□ -0.68
PNKP-202ENST00000593706 DNASE2O00115 360 aaPredicted RBP10.79□□□□□ -0.68
PNKP-202ENST00000593706 DEFB4AO15263 64 aa10.79□□□□□ -0.68
PNKP-202ENST00000593706 SNCAP37840 140 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms