RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PPP1R27Q86WC6 154 aa15.77■□□□□ 0.12
CLIP3-206ENST00000593074 NECAP1Q8NC96 275 aa15.77■□□□□ 0.12
CLIP3-206ENST00000593074 NPIPB3Q92617 1050 aa15.77■□□□□ 0.12
CLIP3-206ENST00000593074 UHRF2Q96PU4 802 aa15.77■□□□□ 0.12
CLIP3-206ENST00000593074 ELOVL1Q9BW60 279 aa15.77■□□□□ 0.12
CLIP3-206ENST00000593074 CRYGCP07315 174 aa15.77■□□□□ 0.11
CLIP3-206ENST00000593074 GPR6P46095 362 aaPredicted RBP15.77■□□□□ 0.11
CLIP3-206ENST00000593074 MEOX2P50222 304 aa15.77■□□□□ 0.11
CLIP3-206ENST00000593074 LDLRAD2Q5SZI1 272 aa15.77■□□□□ 0.11
CLIP3-206ENST00000593074 MRPL36Q9P0J6 103 aaKnown RBP15.77■□□□□ 0.11
CLIP3-206ENST00000593074 SRP14P37108 136 aaKnown RBP15.76■□□□□ 0.11
CLIP3-206ENST00000593074 ARF6P62330 175 aa15.76■□□□□ 0.11
CLIP3-206ENST00000593074 TPTE2P1Q5T6R2 138 aa15.76■□□□□ 0.11
CLIP3-206ENST00000593074 SRD5A3Q9H8P0 318 aa15.76■□□□□ 0.11
CLIP3-206ENST00000593074 A6NNC1 897 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 OR7C2O60412 319 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 C8orf88P0DMB2 117 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 MFAP2P55001 183 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 SELENOTP62341 195 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 PAX2Q02962 417 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 ETFRF1Q6IPR1 90 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 OR5T1Q8NG75 326 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 DNAJC4Q9NNZ3 241 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 PGPEP1LA6NFU8 196 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 TEX22C9J3V5 150 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 GGCTO75223 188 aaKnown RBP15.75■□□□□ 0.11
CLIP3-206ENST00000593074 NDUFS7O75251 213 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 HOXA5P20719 270 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 FAM167A-AS1Q96KT0 104 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 PFDN5Q99471 154 aa15.75■□□□□ 0.11
CLIP3-206ENST00000593074 TIMM23O14925 209 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 PPP1R2P9O14990 202 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 HTR1DP28221 377 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 EFNA4P52798 201 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 HCP5Q6MZN7 132 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 OR1P1Q8NH06 330 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 FRZBQ92765 325 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 TCEAL7Q9BRU2 100 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 AURKAIP1Q9NWT8 199 aaPredicted RBP15.74■□□□□ 0.11
CLIP3-206ENST00000593074 ODF3BA8MYP8 253 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 C9JCJ5 164 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 IGHV3-48P01763 117 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 SMIM6P0DI80 62 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 ZNF90Q03938 601 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 MORN5Q5VZ52 161 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 OR1L4Q8NGR5 311 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 SFRP2Q96HF1 295 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 SLC25A2Q9BXI2 301 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 FBXL15Q9H469 300 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 DPM3Q9P2X0 92 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 LY96Q9Y6Y9 160 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 PLXNB1O43157 2135 aa15.74■□□□□ 0.11
CLIP3-206ENST00000593074 CORTO00230 105 aa15.73■□□□□ 0.11
CLIP3-206ENST00000593074 PRTN3P24158 256 aa15.73■□□□□ 0.11
CLIP3-206ENST00000593074 MISP3Q96FF7 219 aa15.73■□□□□ 0.11
CLIP3-206ENST00000593074 COX7A2P2O60397 106 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 TRGC1P0CF51 173 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 NDUFA6P56556 154 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 BPIFB3P59826 476 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 TMEM116Q8NCL8 245 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 CFHR4Q92496 578 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 IMMP2LQ96T52 175 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 F11RQ9Y624 299 aaKnown RBP15.72■□□□□ 0.11
CLIP3-206ENST00000593074 A0A1W2PPQ1 181 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 A0A1W2PRE2 83 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 GGTLC3B5MD39 225 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 PPP5D1E7EU14 171 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 TYMSP04818 313 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 CEACAM3P40198 252 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 RUSC1-AS1Q66K80 236 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 KCNIP4Q6PIL6 250 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 PATE2Q6UY27 113 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 OR2T10Q8NGZ9 312 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 OCC1Q8TAD7 63 aa15.72■□□□□ 0.11
CLIP3-206ENST00000593074 OR10J4P0C629 311 aa15.71■□□□□ 0.11
CLIP3-206ENST00000593074 CDX1P47902 265 aaPredicted RBP15.71■□□□□ 0.11
CLIP3-206ENST00000593074 C10orf113Q5VZT2 155 aa15.71■□□□□ 0.11
CLIP3-206ENST00000593074 C1orf122Q6ZSJ8 110 aa15.71■□□□□ 0.11
CLIP3-206ENST00000593074 SRSF12Q8WXF0 261 aaKnown RBP15.71■□□□□ 0.11
CLIP3-206ENST00000593074 TRGV9Q99603 122 aa15.71■□□□□ 0.11
CLIP3-206ENST00000593074 SRSF8Q9BRL6 282 aaKnown RBP15.71■□□□□ 0.11
CLIP3-206ENST00000593074 MDFIC2A0A1B0GVS7 189 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 FAM3BP58499 235 aaPredicted RBP15.71■□□□□ 0.1
CLIP3-206ENST00000593074 LCN2P80188 198 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 KLRD1Q13241 179 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 TEX38Q6PEX7 206 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 C19orf35Q6ZS72 473 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 KIR3DL3Q8N743 410 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 OR4X1Q8NH49 305 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 C22orf15Q8WYQ4 148 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 ZNF355PQ9NSJ1 428 aa15.71■□□□□ 0.1
CLIP3-206ENST00000593074 TRAV5A0A0B4J249 113 aa15.7■□□□□ 0.1
CLIP3-206ENST00000593074 FCN1O00602 326 aa15.7■□□□□ 0.1
CLIP3-206ENST00000593074 APELAP0DMC3 54 aa15.7■□□□□ 0.1
CLIP3-206ENST00000593074 OR5AU1Q8NGC0 362 aa15.7■□□□□ 0.1
CLIP3-206ENST00000593074 TNFRSF19Q9NS68 423 aa15.7■□□□□ 0.1
CLIP3-206ENST00000593074 IFITM10A6NMD0 228 aa15.69■□□□□ 0.1
CLIP3-206ENST00000593074 K7EN84 100 aa15.69■□□□□ 0.1
CLIP3-206ENST00000593074 UBE2L3P68036 154 aaKnown RBP15.69■□□□□ 0.1
CLIP3-206ENST00000593074 DMRT1Q9Y5R6 373 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms