RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NUDT19A8MXV4 375 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 LY86O95711 162 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 PF4P02776 101 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 PRB2P02812 416 aaPredicted RBP7.43□□□□□ -1.22
DDX39A-220ENST00000593008 IFNA4P05014 189 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 EDN2P20800 178 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 GPR183P32249 361 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 OPRK1P41145 380 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 RAP2BP61225 183 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 EWSR1Q01844 656 aaKnown RBP eCLIP7.43□□□□□ -1.228e-7■□□□□ 11.3
DDX39A-220ENST00000593008 KLK9Q2XQG4 91 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 SLC16A13Q7RTY0 426 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 AKAP14Q86UN6 197 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 NOXA1Q86UR1 476 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 TMEM252Q8N6L7 170 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 NECAP1Q8NC96 275 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 ZNF502Q8TBZ5 544 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 ACY3Q96HD9 319 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 RAB40CQ96S21 281 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 NEURL2Q9BR09 285 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 SMIM3Q9BZL3 60 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 SLA2Q9H6Q3 261 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 LYRM2Q9NU23 88 aaPredicted RBP7.43□□□□□ -1.22
DDX39A-220ENST00000593008 KLK9Q9UKQ9 250 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 STRAPQ9Y3F4 350 aaKnown RBP7.43□□□□□ -1.22
DDX39A-220ENST00000593008 IGHV3OR16-8A0A075B7F1 116 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 RNF222A6NCQ9 220 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 OR2T8A6NH00 312 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 H3BUA1 57 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 TSC22D2O75157 780 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 LGALS1P09382 135 aaKnown RBP7.42□□□□□ -1.22
DDX39A-220ENST00000593008 LYL1P12980 280 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 IGLL1P15814 213 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 CD33P20138 364 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 RND2P52198 227 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 SUB1P53999 127 aaKnown RBP eCLIP7.42□□□□□ -1.22
DDX39A-220ENST00000593008 CYCSP99999 105 aaKnown RBP7.42□□□□□ -1.22
DDX39A-220ENST00000593008 NHLH2Q02577 135 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 ATP5G2Q06055 141 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 CLEC19AQ6UXS0 136 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 RAX2Q96IS3 184 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 CIB3Q96Q77 187 aaPredicted RBP7.42□□□□□ -1.22
DDX39A-220ENST00000593008 CHRDL1Q9BU40 450 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 WFDC1Q9HC57 220 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 SELENOKQ9Y6D0 94 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
DDX39A-220ENST00000593008 IGKV1OR2-108A0A075B7D4 117 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 FAM223BA6NKX1 122 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 E5RGE8 158 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 I3L521 148 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 BMPR1BO00238 502 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 ARPC5O15511 151 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 HIST1H1BP16401 226 aaKnown RBP7.41□□□□□ -1.22
DDX39A-220ENST00000593008 ADMP35318 185 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 P2RY1P47900 373 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 NKX2-5P52952 324 aaPredicted RBP7.41□□□□□ -1.22
DDX39A-220ENST00000593008 SLURP1P55000 103 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 CD69Q07108 199 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 SLC38A11Q08AI6 406 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 CLINT1Q14677 625 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 BEAN1Q3B7T3 259 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 TIGITQ495A1 244 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 Q56UQ5 140 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 SAMD5Q5TGI4 173 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 ACSM6Q6P461 480 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 FAM223AQ8IWN6 122 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 C21orf62Q9NYP8 219 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 RFNGQ9Y644 331 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 U3KQ87 197 aa7.41□□□□□ -1.22
DDX39A-220ENST00000593008 IGKV1D-37A0A075B6S9 117 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 UBE2L5PA0A1B0GUS4 154 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 SMCO3A2RU48 225 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 BOLA2-SMG1P6H3BVE0 249 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 SCGB2A1O75556 95 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 BRI3O95415 125 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 SLC25A4P12235 298 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 PVALBP20472 110 aaPredicted RBP7.4□□□□□ -1.22
DDX39A-220ENST00000593008 RPL12P30050 165 aaKnown RBP7.4□□□□□ -1.22
DDX39A-220ENST00000593008 SULT1A1P50225 295 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 AP2S1P53680 142 aaPredicted RBP7.4□□□□□ -1.22
DDX39A-220ENST00000593008 ATP5IP56385 69 aaPredicted RBP7.4□□□□□ -1.22
DDX39A-220ENST00000593008 TAS2R30P59541 319 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 GAMTQ14353 236 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 ZNF343Q6P1L6 599 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 TMEM182Q6ZP80 229 aaPredicted RBP7.4□□□□□ -1.22
DDX39A-220ENST00000593008 TCTE3Q8IZS6 198 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 LINC00482Q8N8I6 264 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 THAP6Q8TBB0 222 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 RNASEH2CQ8TDP1 164 aaKnown RBP7.4□□□□□ -1.22
DDX39A-220ENST00000593008 C4orf3Q8WVX3 66 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 NPIPB3Q92617 1050 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 USMG5Q96IX5 58 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 UBE2E2Q96LR5 201 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 ZMAT5Q9UDW3 170 aaKnown RBP7.4□□□□□ -1.22
DDX39A-220ENST00000593008 FBXL17Q9UF56 701 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 TNFSF18Q9UNG2 199 aa7.4□□□□□ -1.22
DDX39A-220ENST00000593008 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
DDX39A-220ENST00000593008 OR2C1O95371 312 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 CLEC3BP05452 202 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms