RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 DPRXA6NFQ7 191 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 MLANAQ16655 118 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 FAM231DQ6ZW35 169 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 M0QZ24 198 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 HYPMO75409 117 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 ITLN1Q8WWA0 313 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 CACNG8Q8WXS5 425 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 ZNF331Q9NQX6 463 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 SERTAD4Q9NUC0 356 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 PROCRQ9UNN8 238 aa12.09□□□□□ -0.47
SMARCA4-219ENST00000592604 IGKV1-16P04430 117 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 GATA4P43694 442 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 TFPI2P48307 235 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 SELENOVP59797 346 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 MMDQ15546 238 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 FAM201AQ5SY85 155 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 HES3Q5TGS1 186 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 SLC25A48Q6ZT89 311 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 C18orf32Q8TCD1 76 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 SLC25A2Q9BXI2 301 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 NBEAQ8NFP9 2946 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 CDX4O14627 284 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 FAM168AQ92567 244 aa12.08□□□□□ -0.48
SMARCA4-219ENST00000592604 GLRXP35754 106 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 SLAQ13239 276 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 STUMQ69YW2 141 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 DUX4L9Q6RFH8 374 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 ZNF714Q96N38 554 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 M0R296 226 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 SPRY3O43610 288 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 FAM19A2Q8N3H0 131 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 KLHDC1Q8N7A1 406 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 BORCS7Q96B45 105 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 MORN5Q5VZ52 161 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 SPACA3Q8IXA5 215 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 RNF7Q9UBF6 113 aa12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 RPUSD1Q9UJJ7 312 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-219ENST00000592604 CADP27708 2225 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 IGLV3-9A0A075B6K5 115 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 TRAV5A0A0B4J249 113 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 INS-IGF2F8WCM5 200 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 TM4SF5O14894 197 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 CA1P00915 261 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 SAA1P0DJI8 122 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 CHRNB4P30926 498 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 UBE2L3P68036 154 aaKnown RBP12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 IGFL2Q6UWQ7 119 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 GAFA1Q96PS6 74 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 GPR179Q6PRD1 2367 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 DLL1O00548 723 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 PLA2G2CQ5R387 149 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 STPG4Q8N801 248 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 FDCSPQ8NFU4 85 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 GRAMD2BQ96HH9 432 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 TXN2Q99757 166 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 NDUFA4L2Q9NRX3 87 aa12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 AMMECR1Q9Y4X0 333 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-219ENST00000592604 PMCHL1Q16048 86 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 Q6ZN92 141 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 OR10W1Q8NGF6 305 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 LINC00479Q96M42 142 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 SSBP3Q9BWW4 388 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 WDFY4Q6ZS81 3184 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 CCL11P51671 97 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 NHLRC2Q8NBF2 726 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 NUP35Q8NFH5 326 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 OSR1Q8TAX0 266 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 CLEC7AQ9BXN2 247 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 WNT10AQ9GZT5 417 aa12.05□□□□□ -0.48
SMARCA4-219ENST00000592604 NTF3P20783 257 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 TBR1Q16650 682 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 GDF5OSQ5U4N7 250 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 PRSS57Q6UWY2 283 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 ZNF788Q6ZQV5 615 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 OR2T6Q8NHC8 308 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 PRRC2CQ9Y520 2896 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 RAI1Q7Z5J4 1906 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 TRAV17A0A0B4J275 112 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 OR2J3O76001 311 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 NDUFB8O95169 186 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 ERHP84090 104 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 TNXAQ16473 311 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 ZNF833PQ6ZTB9 187 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 ZNF329Q86UD4 541 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 CHRDL1Q9BU40 450 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 ZNF355PQ9NSJ1 428 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 M0R1B8 84 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 MFAP2P55001 183 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 C3orf36Q3SXR2 165 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 TIMM23BQ5SRD1 257 aa12.04□□□□□ -0.48
SMARCA4-219ENST00000592604 ZNF596Q8TC21 504 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms