RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SLC25A33Q9BSK2 321 aa12.63□□□□□ -0.39
MBD1-227ENST00000592060 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
MBD1-227ENST00000592060 IFITM10A6NMD0 228 aa12.62□□□□□ -0.39
MBD1-227ENST00000592060 C8orf88P0DMB2 117 aa12.62□□□□□ -0.39
MBD1-227ENST00000592060 MRPL41Q8IXM3 137 aaKnown RBP12.62□□□□□ -0.39
MBD1-227ENST00000592060 RNF2Q99496 336 aa12.62□□□□□ -0.39
MBD1-227ENST00000592060 CHODLQ9H9P2 273 aa12.62□□□□□ -0.39
MBD1-227ENST00000592060 PLXNB1O43157 2135 aa12.62□□□□□ -0.39
MBD1-227ENST00000592060 A0A1W2PPR1 153 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 PPP1R2P9O14990 202 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 CDX1P47902 265 aaPredicted RBP12.61□□□□□ -0.39
MBD1-227ENST00000592060 MORN5Q5VZ52 161 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 SLC25A2Q9BXI2 301 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 C9JCJ5 164 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 OR7C2O60412 319 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 IGHV3-48P01763 117 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 TYMSP04818 313 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 SFTPCP11686 197 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 PAX2Q02962 417 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 TPTE2P1Q5T6R2 138 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 RUSC1-AS1Q66K80 236 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 OR11H6Q8NGC7 330 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 OR2T10Q8NGZ9 312 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 OCC1Q8TAD7 63 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 SFRP2Q96HF1 295 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 DNAJC4Q9NNZ3 241 aa12.61□□□□□ -0.39
MBD1-227ENST00000592060 ABCA4P78363 2273 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 A0A1W2PPQ1 181 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 ZNF90Q03938 601 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 HCP5Q6MZN7 132 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 PATE2Q6UY27 113 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 PPP1R27Q86WC6 154 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 IMMP2LQ96T52 175 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 RNF5Q99942 180 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 LY96Q9Y6Y9 160 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 ZFYVE26Q68DK2 2539 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 MDFIC2A0A1B0GVS7 189 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 GGTLC3B5MD39 225 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 M0R1W7 72 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 SELENOTP62341 195 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 CLEC12BQ2HXU8 276 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 PFDN5Q99471 154 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
MBD1-227ENST00000592060 TRAV5A0A0B4J249 113 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 PPP5D1E7EU14 171 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 K7EN84 100 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 ARF6P62330 175 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 C4orf17Q53FE4 359 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 ETFRF1Q6IPR1 90 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 TEX38Q6PEX7 206 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 KCNIP4Q6PIL6 250 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 OR1L4Q8NGR5 311 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 OR1P1Q8NH06 330 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 MISP3Q96FF7 219 aa12.59□□□□□ -0.39
MBD1-227ENST00000592060 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
MBD1-227ENST00000592060 ELOA3CA0A087WX78 387 aaPredicted RBP12.58□□□□□ -0.4
MBD1-227ENST00000592060 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 PCP4L1A6NKN8 68 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 ODF3BA8MYP8 253 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 TIMM23O14925 209 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 COX7A2P2O60397 106 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
MBD1-227ENST00000592060 OR10J4P0C629 311 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 FAM3BP58499 235 aaPredicted RBP12.58□□□□□ -0.4
MBD1-227ENST00000592060 LCN2P80188 198 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 UNQ6494/PRO21346Q6UXR6 183 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 CFHR4Q92496 578 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 EAF1Q96JC9 268 aaPredicted RBP12.58□□□□□ -0.4
MBD1-227ENST00000592060 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.4
MBD1-227ENST00000592060 PKD1L2Q7Z442 2459 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 LOC105371242A0A075B767 164 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 HNF1AP20823 631 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 HTR1DP28221 377 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 BPIFB3P59826 476 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 KLRD1Q13241 179 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 C10orf113Q5VZT2 155 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 OR5AU1Q8NGC0 362 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 TRGV9Q99603 122 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 ZNF355PQ9NSJ1 428 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 DMRT1Q9Y5R6 373 aa12.58□□□□□ -0.4
MBD1-227ENST00000592060 HRNRQ86YZ3 2850 aaPredicted RBP12.57□□□□□ -0.4
MBD1-227ENST00000592060 APELAP0DMC3 54 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 CRYBB3P26998 211 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 FOXL1Q12952 345 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 GFI1BQ5VTD9 330 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 TMEM116Q8NCL8 245 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 SRSF12Q8WXF0 261 aaKnown RBP12.57□□□□□ -0.4
MBD1-227ENST00000592060 DPM3Q9P2X0 92 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 ARHGAP32A7KAX9 2087 aa12.57□□□□□ -0.4
MBD1-227ENST00000592060 CORTO00230 105 aa12.56□□□□□ -0.4
MBD1-227ENST00000592060 FCN1O00602 326 aa12.56□□□□□ -0.4
MBD1-227ENST00000592060 MOSP00540 346 aa12.56□□□□□ -0.4
MBD1-227ENST00000592060 PRTN3P24158 256 aa12.56□□□□□ -0.4
MBD1-227ENST00000592060 LGALS4P56470 323 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms