RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 CDC42EP3Q9UKI2 254 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 PROCRQ9UNN8 238 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 USP24Q9UPU5 2620 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 IGKV1OR2-108A0A075B7D4 117 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 IZUMO1RA6ND01 250 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 BMPR1BO00238 502 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 ZNF324O75467 553 aaPredicted RBP8.83□□□□□ -1
VPS4B-206ENST00000591475 LINC00614P0C842 121 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 CTRLP40313 264 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 ZNF83P51522 516 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 MSMPQ1L6U9 139 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 SPRNQ5BIV9 151 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 CYB5R2Q6BCY4 276 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 MRPL54Q6P161 138 aaKnown RBP8.83□□□□□ -1
VPS4B-206ENST00000591475 MOB3BQ86TA1 216 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 RCHY1Q96PM5 261 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 COMMD5Q9GZQ3 224 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 SLC35D1Q9NTN3 355 aa8.83□□□□□ -1
VPS4B-206ENST00000591475 SMG1Q96Q15 3661 aaKnown RBP8.83□□□□□ -1
VPS4B-206ENST00000591475 TEX50A0A1B0GTY4 177 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 APCSP02743 223 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 NPSP0C0P6 89 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 GATA2P23769 480 aaPredicted RBP8.82□□□□□ -1
VPS4B-206ENST00000591475 GNG10P50151 68 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 KLF3P57682 345 aaPredicted RBP8.82□□□□□ -1
VPS4B-206ENST00000591475 C19orf35Q6ZS72 473 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 OR1L8Q8NGR8 309 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 ITLN1Q8WWA0 313 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 SLC25A33Q9BSK2 321 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 ZNF331Q9NQX6 463 aaPredicted RBP8.82□□□□□ -1
VPS4B-206ENST00000591475 UQCR10Q9UDW1 63 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 SLC25A15Q9Y619 301 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 DSCAMO60469 2012 aa8.82□□□□□ -1
VPS4B-206ENST00000591475 SPRY3O43610 288 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 RNASE2P10153 161 aaKnown RBP8.81□□□□□ -1
VPS4B-206ENST00000591475 USF1P22415 310 aaPredicted RBP8.81□□□□□ -1
VPS4B-206ENST00000591475 PRRX1P54821 245 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 CD69Q07108 199 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 TMEM30BQ3MIR4 351 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 RASL11AQ6T310 242 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 OR9G1Q8NH87 305 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 FAM222BQ8WU58 562 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 VKORC1Q9BQB6 163 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 PRR14LQ5THK1 2151 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 DPRXA6NFQ7 191 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 C3orf79P0CE67 100 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
VPS4B-206ENST00000591475 FAM201AQ5SY85 155 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 NIT1Q86X76 327 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 OR5B3Q8NH48 314 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 WIPF2Q8TF74 440 aaPredicted RBP8.81□□□□□ -1
VPS4B-206ENST00000591475 TSKUQ8WUA8 353 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 BORCS7Q96B45 105 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 BET1LQ9NYM9 111 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 MRPL27Q9P0M9 148 aaKnown RBP8.81□□□□□ -1
VPS4B-206ENST00000591475 SH3BGRL2Q9UJC5 107 aa8.81□□□□□ -1
VPS4B-206ENST00000591475 M0R1B8 84 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 CT45A6P0DMU7 189 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 CT45A5P0DMU8 189 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 CT45A7P0DMV0 189 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 IGLC2P0DOY2 106 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 IGLC3P0DOY3 106 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 GLRXP35754 106 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 STUMQ69YW2 141 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 ALKBH2Q6NS38 261 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 KLHDC1Q8N7A1 406 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 ZNF714Q96N38 554 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 TXN2Q99757 166 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 SLC25A2Q9BXI2 301 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 RNF7Q9UBF6 113 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 A0A0G2JNJ9 132 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 SRRM4A7MD48 611 aaKnown RBP8.8□□□□□ -1
VPS4B-206ENST00000591475 IGKV1-16P04430 117 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 SAA1P0DJI8 122 aaPredicted RBP8.8□□□□□ -1
VPS4B-206ENST00000591475 CA7P43166 264 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 MLANAQ16655 118 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 DUX4L9Q6RFH8 374 aaPredicted RBP8.8□□□□□ -1
VPS4B-206ENST00000591475 SLC25A48Q6ZT89 311 aaKnown RBP8.8□□□□□ -1
VPS4B-206ENST00000591475 FAM231DQ6ZW35 169 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 NHLRC2Q8NBF2 726 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 CACNG8Q8WXS5 425 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 RND1Q92730 232 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 FAM167A-AS1Q96KT0 104 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 LINC00574Q9H8X3 128 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 DNAJC4Q9NNZ3 241 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 Q9UFV3 132 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 RPUSD1Q9UJJ7 312 aaKnown RBP8.8□□□□□ -1
VPS4B-206ENST00000591475 ZFP30Q9Y2G7 519 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 IGSF10Q6WRI0 2623 aa8.8□□□□□ -1
VPS4B-206ENST00000591475 INTS1Q8N201 2190 aaKnown RBP8.79□□□□□ -1
VPS4B-206ENST00000591475 ZGRF1Q86YA3 2104 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 PSMB11A5LHX3 300 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 HYPMO75409 117 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 NTF3P20783 257 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 CHRNB4P30926 498 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 GATA4P43694 442 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 TFPI2P48307 235 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 HNRNPA3P51991 378 aaKnown RBP8.79□□□□□ -1
VPS4B-206ENST00000591475 ERHP84090 104 aaKnown RBP8.79□□□□□ -1
VPS4B-206ENST00000591475 MMDQ15546 238 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms