RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 C15orf62A8K5M9 175 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 CORTO00230 105 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 IL7P13232 177 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 VAMP1P23763 118 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 BTCP35070 178 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 NPBWR1P48145 328 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 RELQ04864 619 aaPredicted RBP16.75■□□□□ 0.27
MBD3-208ENST00000590830 TNFRSF9Q07011 255 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 RBMS2Q15434 407 aaKnown RBP16.75■□□□□ 0.27
MBD3-208ENST00000590830 C2orf83Q53S99 150 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 DEFB125Q8N687 156 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 OR10C1Q96KK4 312 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 HSPB7Q9UBY9 170 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 FLVCR2Q9UPI3 526 aa16.75■□□□□ 0.27
MBD3-208ENST00000590830 TRAV25A0A0B4J276 109 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 NAP1L6A6NFF2 107 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 PITX3O75364 302 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 YIF1AO95070 293 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 NDUFB6O95139 128 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 INPP1P49441 399 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 TOMM20LQ6UXN7 152 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 LINC00322Q6ZN03 302 aaPredicted RBP16.74■□□□□ 0.27
MBD3-208ENST00000590830 CENPSQ8N2Z9 138 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 RBKSQ9H477 322 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 TUBA4BQ9H853 241 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 SMPXQ9UHP9 88 aa16.74■□□□□ 0.27
MBD3-208ENST00000590830 A0A1B0GU03 582 aa16.73■□□□□ 0.27
MBD3-208ENST00000590830 OPRK1P41145 380 aa16.73■□□□□ 0.27
MBD3-208ENST00000590830 HAGHQ16775 308 aa16.73■□□□□ 0.27
MBD3-208ENST00000590830 SLC24A4Q8NFF2 622 aa16.73■□□□□ 0.27
MBD3-208ENST00000590830 OR4X1Q8NH49 305 aa16.73■□□□□ 0.27
MBD3-208ENST00000590830 TM2D3Q9BRN9 247 aa16.73■□□□□ 0.27
MBD3-208ENST00000590830 STAB2Q8WWQ8 2551 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 IGHV3-49A0A0A0MS15 119 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 A6NHS1 94 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 OR11H12B2RN74 326 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 PLA2G10O15496 165 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 CLN5O75503 358 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 RBPMS2Q6ZRY4 209 aaKnown RBP16.72■□□□□ 0.27
MBD3-208ENST00000590830 WWC2-AS2Q96NR7 200 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 CACFD1Q9UGQ2 172 aa16.72■□□□□ 0.27
MBD3-208ENST00000590830 IGHV7-4-1A0A0J9YVY3 117 aa16.71■□□□□ 0.27
MBD3-208ENST00000590830 DUXBA0A1W2PPF3 345 aa16.71■□□□□ 0.27
MBD3-208ENST00000590830 RBMY1BA6NDE4 496 aaKnown RBP16.71■□□□□ 0.27
MBD3-208ENST00000590830 RBMY1EA6NEQ0 496 aaKnown RBP16.71■□□□□ 0.27
MBD3-208ENST00000590830 CHEK1O14757 476 aa16.71■□□□□ 0.27
MBD3-208ENST00000590830 RBMY1DP0C7P1 496 aaKnown RBP16.71■□□□□ 0.27
MBD3-208ENST00000590830 DTD1Q8TEA8 209 aa16.71■□□□□ 0.27
MBD3-208ENST00000590830 RCHY1Q96PM5 261 aa16.71■□□□□ 0.27
MBD3-208ENST00000590830 HIPK2Q9H2X6 1198 aa16.71■□□□□ 0.27
MBD3-208ENST00000590830 ZFAND3Q9H8U3 227 aa16.71■□□□□ 0.27
MBD3-208ENST00000590830 TENM3Q9P273 2699 aa16.71■□□□□ 0.26
MBD3-208ENST00000590830 C9orf170A2RU37 121 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 TSPAN4O14817 238 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 IGKV1-17P01599 117 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 UBE2MP61081 183 aaKnown RBP16.7■□□□□ 0.26
MBD3-208ENST00000590830 PRSS54Q6PEW0 395 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 ZNF600Q6ZNG1 722 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 TMEM116Q8NCL8 245 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 OR52B4Q8NGK2 314 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 OR1S1Q8NH92 325 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 RNASEH2CQ8TDP1 164 aaKnown RBP16.7■□□□□ 0.26
MBD3-208ENST00000590830 RNF2Q99496 336 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 RHPN1-AS1Q9BWJ2 59 aa16.7■□□□□ 0.26
MBD3-208ENST00000590830 PUS1Q9Y606 427 aaKnown RBP eCLIP16.7■□□□□ 0.26
MBD3-208ENST00000590830 IGHV3OR16-13A0A075B7E8 117 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 TRAV14DV4A0A0A6YYC5 116 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 IGHV3-74A0A0B4J1X5 117 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 APOHP02749 345 aaPredicted RBP16.69■□□□□ 0.26
MBD3-208ENST00000590830 HOXB5P09067 269 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 NPY1RP25929 384 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 SLC16A13Q7RTY0 426 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 LILRB2Q8N423 598 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 C7orf50Q9BRJ6 194 aaKnown RBP16.69■□□□□ 0.26
MBD3-208ENST00000590830 SRD5A3Q9H8P0 318 aa16.69■□□□□ 0.26
MBD3-208ENST00000590830 SLC25A6P12236 298 aa16.68■□□□□ 0.26
MBD3-208ENST00000590830 ANXA7P20073 488 aaKnown RBP16.68■□□□□ 0.26
MBD3-208ENST00000590830 CNPY1Q3B7I2 92 aa16.68■□□□□ 0.26
MBD3-208ENST00000590830 TIGITQ495A1 244 aa16.68■□□□□ 0.26
MBD3-208ENST00000590830 SPAG8Q99932 426 aaPredicted RBP16.68■□□□□ 0.26
MBD3-208ENST00000590830 ZMAT4Q9H898 229 aa16.68■□□□□ 0.26
MBD3-208ENST00000590830 TMED3Q9Y3Q3 217 aa16.68■□□□□ 0.26
MBD3-208ENST00000590830 U3KQ87 197 aa16.68■□□□□ 0.26
MBD3-208ENST00000590830 PIGBOS1A0A0B4J2F0 54 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 RPS10-NUDT3A0A1W2PQS6 291 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 CENPXA8MT69 81 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 IFNA10P01566 189 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 RND2P52198 227 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 GGNBP1Q5YKI7 109 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 FAM90A2PQ658T7 463 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 LAMTOR1Q6IAA8 161 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 CITED4Q96RK1 184 aa16.67■□□□□ 0.26
MBD3-208ENST00000590830 OR4E1P0C645 316 aa16.66■□□□□ 0.26
MBD3-208ENST00000590830 IGLC1P0CG04 106 aa16.66■□□□□ 0.26
MBD3-208ENST00000590830 DHRS2Q13268 280 aa16.66■□□□□ 0.26
MBD3-208ENST00000590830 NBEAL2Q6ZNJ1 2754 aa16.65■□□□□ 0.26
MBD3-208ENST00000590830 ADAP1O75689 374 aa16.65■□□□□ 0.26
MBD3-208ENST00000590830 SLC25A4P12235 298 aa16.65■□□□□ 0.26
MBD3-208ENST00000590830 NOXA1Q86UR1 476 aa16.65■□□□□ 0.26
MBD3-208ENST00000590830 ST8SIA2Q92186 375 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms