RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 RPS10-NUDT3A0A1W2PQS6 291 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 TMEM213A2RRL7 107 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 GNG7O60262 68 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 MED6O75586 246 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 IGHV3-48P01763 117 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 GP9P14770 177 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 CBLN1P23435 193 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 NPY1RP25929 384 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 ADMP35318 185 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 ATP5IP56385 69 aaPredicted RBP9.03□□□□□ -0.96
LIG3-213ENST00000590630 DEFB121Q5J5C9 76 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 GGNBP1Q5YKI7 109 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 UNQ9165/PRO28630Q6UXU0 137 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 ADAMTSL5Q6ZMM2 481 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 HAPLN4Q86UW8 402 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 DYNLRB2Q8TF09 96 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 TMEM190Q8WZ59 177 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 MARC2Q969Z3 335 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 RBKSQ9H477 322 aa9.03□□□□□ -0.96
LIG3-213ENST00000590630 DAZ1Q9NQZ3 744 aaKnown RBP9.03□□□□□ -0.96
LIG3-213ENST00000590630 TECRQ9NZ01 308 aaKnown RBP9.03□□□□□ -0.96
LIG3-213ENST00000590630 TRAV6A0A075B6T7 132 aa9.02□□□□□ -0.97
LIG3-213ENST00000590630 SCGB2A1O75556 95 aa9.02□□□□□ -0.97
LIG3-213ENST00000590630 IFNA10P01566 189 aa9.02□□□□□ -0.97
LIG3-213ENST00000590630 IFNA21P01568 189 aa9.02□□□□□ -0.97
LIG3-213ENST00000590630 OR4X1Q8NH49 305 aa9.02□□□□□ -0.97
LIG3-213ENST00000590630 MITD1Q8WV92 249 aa9.02□□□□□ -0.97
LIG3-213ENST00000590630 FNDC4Q9H6D8 234 aaPredicted RBP9.02□□□□□ -0.97
LIG3-213ENST00000590630 LSM4Q9Y4Z0 139 aaKnown RBP9.02□□□□□ -0.97
LIG3-213ENST00000590630 C15orf62A8K5M9 175 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 ADAP1O75689 374 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 C8orf88P0DMB2 117 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 SLC25A4P12235 298 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 DEFB114Q30KQ6 69 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 CD300EQ496F6 205 aaPredicted RBP9.01□□□□□ -0.97
LIG3-213ENST00000590630 TM4SF20Q53R12 229 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 UXS1Q8NBZ7 420 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 TMEM170AQ8WVE7 144 aa9.01□□□□□ -0.97
LIG3-213ENST00000590630 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
LIG3-213ENST00000590630 MRPL27Q9P0M9 148 aaKnown RBP9.01□□□□□ -0.97
LIG3-213ENST00000590630 K7EMT4 169 aa9□□□□□ -0.97
LIG3-213ENST00000590630 SYNGR2O43760 224 aa9□□□□□ -0.97
LIG3-213ENST00000590630 CLN5O75503 358 aa9□□□□□ -0.97
LIG3-213ENST00000590630 TMEM50AO95807 157 aa9□□□□□ -0.97
LIG3-213ENST00000590630 H2AFB2P0C5Z0 115 aa9□□□□□ -0.97
LIG3-213ENST00000590630 EDN2P20800 178 aa9□□□□□ -0.97
LIG3-213ENST00000590630 IFITM3Q01628 133 aa9□□□□□ -0.97
LIG3-213ENST00000590630 C11orf87Q6NUJ2 197 aa9□□□□□ -0.97
LIG3-213ENST00000590630 TMEM116Q8NCL8 245 aa9□□□□□ -0.97
LIG3-213ENST00000590630 OR52B4Q8NGK2 314 aa9□□□□□ -0.97
LIG3-213ENST00000590630 ENKURQ8TC29 256 aa9□□□□□ -0.97
LIG3-213ENST00000590630 ZNF431Q8TF32 576 aaPredicted RBP9□□□□□ -0.97
LIG3-213ENST00000590630 CACNG8Q8WXS5 425 aa9□□□□□ -0.97
LIG3-213ENST00000590630 OR10C1Q96KK4 312 aa9□□□□□ -0.97
LIG3-213ENST00000590630 C20orf24Q9BUV8 137 aa9□□□□□ -0.97
LIG3-213ENST00000590630 SMAD5-AS1Q9Y6J3 95 aa9□□□□□ -0.97
LIG3-213ENST00000590630 TRAV30A0A087WSZ9 112 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 IZUMO1RA6ND01 250 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 MPTX1A8MV57 137 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 YIF1AO95070 293 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 IFNA4P05014 189 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 DEFA1P59665 94 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 DEFA3P59666 94 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 RPP30P78346 268 aaKnown RBP8.99□□□□□ -0.97
LIG3-213ENST00000590630 ID3Q02535 119 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 MLANAQ16655 118 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 PRSS54Q6PEW0 395 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 ZNF600Q6ZNG1 722 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 GTSCR1Q86UQ5 136 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 MRPL36Q9P0J6 103 aaKnown RBP8.99□□□□□ -0.97
LIG3-213ENST00000590630 MLXQ9UH92 298 aa8.99□□□□□ -0.97
LIG3-213ENST00000590630 IGHV3OR16-8A0A075B7F1 116 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 IAPPP10997 89 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 NKX2-1P43699 371 aaPredicted RBP8.98□□□□□ -0.97
LIG3-213ENST00000590630 RND2P52198 227 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 RAB11AP62491 216 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 CD69Q07108 199 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 IAH1Q2TAA2 248 aaPredicted RBP8.98□□□□□ -0.97
LIG3-213ENST00000590630 BTNL8Q6UX41 500 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 SLC16A13Q7RTY0 426 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 TMEM61Q8N0U2 210 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 OR4D5Q8NGN0 318 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 ZNF414Q96IQ9 312 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 SEC22CQ9BRL7 303 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 GINS3Q9BRX5 216 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 MAGT1Q9H0U3 335 aa8.98□□□□□ -0.97
LIG3-213ENST00000590630 TRAV25A0A0B4J276 109 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 A0A1B0GVG6 124 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 WRBO00258 174 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 IGKV1-17P01599 117 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 IL5P05113 134 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 IGLC1P0CG04 106 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 OR10J1P30954 320 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 GPX4P36969 197 aaPredicted RBP8.97□□□□□ -0.97
LIG3-213ENST00000590630 TOMM20LQ6UXN7 152 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 NRARPQ7Z6K4 114 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 Q8N1Y9 231 aa8.97□□□□□ -0.97
LIG3-213ENST00000590630 C12orf45Q8N5I9 185 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms