RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 SPCS3P61009 180 aa15.32■□□□□ 0.04
CIRBP-226ENST00000590171 ODF3L2Q3SX64 289 aa15.32■□□□□ 0.04
CIRBP-226ENST00000590171 TOMM20LQ6UXN7 152 aa15.32■□□□□ 0.04
CIRBP-226ENST00000590171 GALNT14Q96FL9 552 aa15.32■□□□□ 0.04
CIRBP-226ENST00000590171 PRR13Q9NZ81 148 aa15.32■□□□□ 0.04
CIRBP-226ENST00000590171 MRPL36Q9P0J6 103 aaKnown RBP15.32■□□□□ 0.04
CIRBP-226ENST00000590171 V9GYH0 126 aa15.32■□□□□ 0.04
CIRBP-226ENST00000590171 TRAV14DV4A0A0A6YYC5 116 aa15.31■□□□□ 0.04
CIRBP-226ENST00000590171 OR4C46A6NHA9 309 aa15.31■□□□□ 0.04
CIRBP-226ENST00000590171 TMEM50AO95807 157 aa15.31■□□□□ 0.04
CIRBP-226ENST00000590171 TMEM187Q14656 261 aa15.31■□□□□ 0.04
CIRBP-226ENST00000590171 TRIM63Q969Q1 353 aa15.31■□□□□ 0.04
CIRBP-226ENST00000590171 IGHV3OR16-13A0A075B7E8 117 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 IGHV3-74A0A0B4J1X5 117 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 OPRK1P41145 380 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 KLF9Q13886 244 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-226ENST00000590171 MLANAQ16655 118 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 ZNF600Q6ZNG1 722 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 IL22RA2Q969J5 263 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 SCGB3A2Q96PL1 93 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 RBM38Q9H0Z9 239 aaKnown RBP15.3■□□□□ 0.04
CIRBP-226ENST00000590171 ZFAND3Q9H8U3 227 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 KCNIP3Q9Y2W7 256 aa15.3■□□□□ 0.04
CIRBP-226ENST00000590171 PUS1Q9Y606 427 aaKnown RBP eCLIP15.3■□□□□ 0.04
CIRBP-226ENST00000590171 SUPT4H1P63272 117 aaKnown RBP15.29■□□□□ 0.04
CIRBP-226ENST00000590171 PYDC2Q56P42 97 aa15.29■□□□□ 0.04
CIRBP-226ENST00000590171 GINS3Q9BRX5 216 aa15.29■□□□□ 0.04
CIRBP-226ENST00000590171 STARD9Q9P2P6 4700 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 A0A1B0GU03 582 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 CLN5O75503 358 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 NXPH3O95157 252 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 AKR1C4P17516 323 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 HTR2BP41595 481 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 ZNF79Q15937 498 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 FAM90A2PQ658T7 463 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 OR4X1Q8NH49 305 aa15.28■□□□□ 0.04
CIRBP-226ENST00000590171 HEYLQ9NQ87 328 aaPredicted RBP15.28■□□□□ 0.04
CIRBP-226ENST00000590171 IGKV3-7A0A075B6H7 116 aa15.27■□□□□ 0.04
CIRBP-226ENST00000590171 CEBPZOSA8MTT3 80 aa15.27■□□□□ 0.04
CIRBP-226ENST00000590171 APOHP02749 345 aaPredicted RBP15.27■□□□□ 0.04
CIRBP-226ENST00000590171 FAUP35544 74 aaKnown RBP15.27■□□□□ 0.04
CIRBP-226ENST00000590171 ST8SIA2Q92186 375 aa15.27■□□□□ 0.04
CIRBP-226ENST00000590171 OVOL2Q9BRP0 275 aa15.27■□□□□ 0.04
CIRBP-226ENST00000590171 SULT1A3P0DMM9 295 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 SULT1A4P0DMN0 295 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 S100A5P33763 92 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 TFPI2P48307 235 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 C2orf83Q53S99 150 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 NMSQ5H8A3 153 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 LYZL2Q7Z4W2 148 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 CCDC190Q86UF4 302 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 LILRB2Q8N423 598 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 TOMM5Q8N4H5 51 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 SLC24A4Q8NFF2 622 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 TMEM170AQ8WVE7 144 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 VSIRQ9H7M9 311 aa15.26■□□□□ 0.03
CIRBP-226ENST00000590171 A0A0B4J2A0 478 aa15.25■□□□□ 0.03
CIRBP-226ENST00000590171 IGHV3-66A0A0C4DH42 116 aa15.25■□□□□ 0.03
CIRBP-226ENST00000590171 AP3S2P59780 193 aa15.25■□□□□ 0.03
CIRBP-226ENST00000590171 TCF24Q7RTU0 167 aa15.25■□□□□ 0.03
CIRBP-226ENST00000590171 SHPKQ9UHJ6 478 aa15.25■□□□□ 0.03
CIRBP-226ENST00000590171 CSMD3Q7Z407 3707 aa15.25■□□□□ 0.03
CIRBP-226ENST00000590171 RPS10-NUDT3A0A1W2PQS6 291 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 IGKV1-17P01599 117 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 BMI1P35226 326 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 APOC4P55056 127 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 ZNF124Q15973 351 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 TIGITQ495A1 244 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 APRG1Q8IVJ8 170 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 GBGT1Q8N5D6 347 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 RNASEH2CQ8TDP1 164 aaKnown RBP15.24■□□□□ 0.03
CIRBP-226ENST00000590171 SACSQ9NZJ4 4579 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 RYR2Q92736 4967 aa15.24■□□□□ 0.03
CIRBP-226ENST00000590171 ANXA3P12429 323 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 NPY1RP25929 384 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 CCR6P51684 374 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 TNFRSF9Q07011 255 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 SMCO1Q147U7 214 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 PRSS54Q6PEW0 395 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 TMED4Q7Z7H5 227 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 LGI3Q8N145 548 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 MAP6D1Q9H9H5 199 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 HSPB7Q9UBY9 170 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 CACFD1Q9UGQ2 172 aa15.23■□□□□ 0.03
CIRBP-226ENST00000590171 ZNF701M0R085 212 aaPredicted RBP15.22■□□□□ 0.03
CIRBP-226ENST00000590171 SCGB2A1O75556 95 aa15.22■□□□□ 0.03
CIRBP-226ENST00000590171 DFFBO76075 338 aa15.22■□□□□ 0.03
CIRBP-226ENST00000590171 IGLC1P0CG04 106 aa15.22■□□□□ 0.03
CIRBP-226ENST00000590171 RPL35AP18077 110 aaKnown RBP15.22■□□□□ 0.03
CIRBP-226ENST00000590171 RND2P52198 227 aa15.22■□□□□ 0.03
CIRBP-226ENST00000590171 SRPXP78539 464 aa15.22■□□□□ 0.03
CIRBP-226ENST00000590171 TRAV30A0A087WSZ9 112 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 KIR2DL5BA0A0G2JN68 375 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 KIR2DL5BA0A0G2JPC4 375 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 CD5P06127 495 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 SLC25A4P12235 298 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 NPPCP23582 126 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 PAFAH1B2P68402 229 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 DEFB135Q30KP9 77 aa15.21■□□□□ 0.03
CIRBP-226ENST00000590171 TMEM128Q5BJH2 165 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms