RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 KLHL30-AS1Q8NEE0 82 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 C4orf3Q8WVX3 66 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 OR5B12Q96R08 314 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 C21orf62Q9NYP8 219 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 FXYD6-FXYD2A0A087WZ82 144 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 CST7O76096 145 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 MFAP4P55083 255 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
ATG4D-211ENST00000589753 NSUN5P1Q3KNT7 163 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 ACSM6Q6P461 480 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 SHISA2Q6UWI4 295 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 C18orf65Q6ZTR6 163 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 SLC16A13Q7RTY0 426 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 HAPLN4Q86UW8 402 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 CACNG8Q8WXS5 425 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 CCDC140Q96MF4 163 aa11.75□□□□□ -0.53
ATG4D-211ENST00000589753 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.74□□□□□ -0.53
ATG4D-211ENST00000589753 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 I3L521 148 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
ATG4D-211ENST00000589753 NUP62P37198 522 aaPredicted RBP11.74□□□□□ -0.53
ATG4D-211ENST00000589753 RUNX1Q01196 453 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 BAXQ07812 192 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 ARL16Q0P5N6 197 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 Q56UQ5 140 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 ZNF546Q86UE3 836 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 UBAC2Q8NBM4 344 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 SLC35E1Q96K37 410 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 TXN2Q99757 166 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 ATRQ13535 2644 aa11.74□□□□□ -0.53
ATG4D-211ENST00000589753 ANKRD34BA5PLL1 514 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 CLEC3BP05452 202 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 S100A11P31949 105 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 FCGR2BP31994 310 aaPredicted RBP11.73□□□□□ -0.53
ATG4D-211ENST00000589753 NPBWR1P48145 328 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 RND2P52198 227 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 HBG1P69891 147 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 HBG2P69892 147 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 DLK1P80370 383 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 NHLH2Q02577 135 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 C8orf86Q6ZUL3 223 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 ACOT7LQ6ZUV0 252 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 OR4X1Q8NH49 305 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 ATP6V0BQ99437 205 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 ZC4H2Q9NQZ6 224 aa11.73□□□□□ -0.53
ATG4D-211ENST00000589753 GAR1Q9NY12 217 aaKnown RBP11.73□□□□□ -0.53
ATG4D-211ENST00000589753 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
ATG4D-211ENST00000589753 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
ATG4D-211ENST00000589753 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
ATG4D-211ENST00000589753 GPR183P32249 361 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 GAMTQ14353 236 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 LILRB2Q8N423 598 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 INO80EQ8NBZ0 244 aaPredicted RBP11.72□□□□□ -0.53
ATG4D-211ENST00000589753 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 ACY3Q96HD9 319 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 AQP10Q96PS8 301 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 NEURL2Q9BR09 285 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 TNFSF18Q9UNG2 199 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 HSPB11Q9Y547 144 aa11.72□□□□□ -0.53
ATG4D-211ENST00000589753 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 PPP5D1E7EU14 171 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 GNG7O60262 68 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 CLN5O75503 358 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 TRBV12-3P01733 135 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 HSPB1P04792 205 aaKnown RBP11.71□□□□□ -0.53
ATG4D-211ENST00000589753 ARL3P36405 182 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 AKR1C1Q04828 323 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 CD300CQ08708 224 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 DEFB136Q30KP8 78 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 OR11H4Q8NGC9 324 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 OR1S2Q8NGQ3 325 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 NPIPB3Q92617 1050 aa11.71□□□□□ -0.53
ATG4D-211ENST00000589753 BSCL2Q96G97 398 aaPredicted RBP11.71□□□□□ -0.53
ATG4D-211ENST00000589753 IGHV4OR15-8A0A075B7B6 117 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 TRAV30A0A087WSZ9 112 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 A0A087WW49 117 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 FNDC10F2Z333 226 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 ARPC5O15511 151 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 TGOLN2O43493 480 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 SCGB2A1O75556 95 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 C1QBP02746 253 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 RAX2Q96IS3 184 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
ATG4D-211ENST00000589753 RNF222A6NCQ9 220 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 HMSDA8MTL9 139 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 LINC01619G3V211 115 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 BMPR1BO00238 502 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms