RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 C1orf122Q6ZSJ8 110 aa12.25□□□□□ -0.45
MBD1-217ENST00000588937 OR1P1Q8NH06 330 aa12.25□□□□□ -0.45
MBD1-217ENST00000588937 BBC3Q96PG8 261 aaPredicted RBP12.25□□□□□ -0.45
MBD1-217ENST00000588937 SRSF8Q9BRL6 282 aaKnown RBP12.25□□□□□ -0.45
MBD1-217ENST00000588937 SLC25A33Q9BSK2 321 aa12.25□□□□□ -0.45
MBD1-217ENST00000588937 COX7A2P2O60397 106 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 TRGC2P03986 189 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 REG1AP05451 166 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 CNTFRP26992 372 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 PRB3Q04118 309 aaPredicted RBP12.24□□□□□ -0.45
MBD1-217ENST00000588937 PLGLAQ15195 96 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 SSX2Q16385 188 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 KIR3DL3Q8N743 410 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 IMMP2LQ96T52 175 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 LY96Q9Y6Y9 160 aa12.24□□□□□ -0.45
MBD1-217ENST00000588937 MDFIC2A0A1B0GVS7 189 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 PSMB11A5LHX3 300 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 CRYGCP07315 174 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 NECAP1Q8NC96 275 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 OR5T1Q8NG75 326 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 TMEM37Q8WXS4 190 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 MISP3Q96FF7 219 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 DERL1Q9BUN8 251 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 SRD5A3Q9H8P0 318 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 MALRD1Q5VYJ5 2156 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 C9JCJ5 164 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
MBD1-217ENST00000588937 C10orf113Q5VZT2 155 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 HCP5Q6MZN7 132 aa12.23□□□□□ -0.45
MBD1-217ENST00000588937 IGKV1D-37A0A075B6S9 117 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 ELOA3CA0A087WX78 387 aaPredicted RBP12.22□□□□□ -0.45
MBD1-217ENST00000588937 A0A1W2PRE2 83 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 ZNF98A6NK75 572 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 ODF3BA8MYP8 253 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 PPP5D1E7EU14 171 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 TIMM23O14925 209 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 MEOX2P50222 304 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 OR2T10Q8NGZ9 312 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 ZNF503Q96F45 646 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 SFRP2Q96HF1 295 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 TRGV9Q99603 122 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 FBXL15Q9H469 300 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 UBTD1Q9HAC8 227 aa12.22□□□□□ -0.45
MBD1-217ENST00000588937 F11RQ9Y624 299 aaKnown RBP12.22□□□□□ -0.45
MBD1-217ENST00000588937 A6NNC1 897 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 TEX22C9J3V5 150 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 GGCTO75223 188 aaKnown RBP12.21□□□□□ -0.45
MBD1-217ENST00000588937 HOXA5P20719 270 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 NDUFA6P56556 154 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 TMEM116Q8NCL8 245 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 OR4X1Q8NH49 305 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 SRSF12Q8WXF0 261 aaKnown RBP12.21□□□□□ -0.45
MBD1-217ENST00000588937 C12orf57Q99622 126 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 TNFRSF19Q9NS68 423 aa12.21□□□□□ -0.45
MBD1-217ENST00000588937 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BKO60814 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 MOSP00540 346 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 PRB1P04280 392 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BJP06899 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BOP23527 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BBP33778 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 EFNA4P52798 201 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 FAM3BP58499 235 aaPredicted RBP12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BDP58876 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BCP62807 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 LCN2P80188 198 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
MBD1-217ENST00000588937 ZNF90Q03938 601 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 MMDQ15546 238 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST2H2BEQ16778 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.2□□□□□ -0.46
MBD1-217ENST00000588937 STXBP6Q8NFX7 210 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BHQ93079 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BNQ99877 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HIST1H2BMQ99879 126 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 SLC25A2Q9BXI2 301 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 A0A1W2PPQ1 181 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HELTA6NFD8 242 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 NBR2O15453 112 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 SMIM6P0DI80 62 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 CDKN1AP38936 164 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 ZNF843Q8N446 348 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 NPBQ8NG41 125 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 OR5AU1Q8NGC0 362 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 OR1L6Q8NGR2 347 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 FAM167A-AS1Q96KT0 104 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 HILPDAQ9Y5L2 63 aa12.2□□□□□ -0.46
MBD1-217ENST00000588937 ABCA4P78363 2273 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 TRBV20OR9-2A0A075B6H5 130 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 A0A1W2PPR1 153 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 CNIH1O95406 144 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 TYMSP04818 313 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 TRGC1P0CF51 173 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 CDX1P47902 265 aaPredicted RBP12.19□□□□□ -0.46
MBD1-217ENST00000588937 MFAP2P55001 183 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 UBE2L3P68036 154 aaKnown RBP12.19□□□□□ -0.46
MBD1-217ENST00000588937 FOXL1Q12952 345 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 MINOS1Q5TGZ0 78 aa12.19□□□□□ -0.46
MBD1-217ENST00000588937 OR10G8Q8NGN5 311 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms