RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 AARDQ4LEZ3 155 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 TMEM230Q96A57 120 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 GALNT14Q96FL9 552 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 RNF2Q99496 336 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 GGTLC1Q9BX51 225 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
TPM4-206ENST00000587201 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 NBEAL2Q6ZNJ1 2754 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 OR4C46A6NHA9 309 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 CEBPZOSA8MTT3 80 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 TMEM50AO95807 157 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 AP3S2P59780 193 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 ZFAND6Q6FIF0 208 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 TOMM20LQ6UXN7 152 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 TOMM5Q8N4H5 51 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 GINS3Q9BRX5 216 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 V9GYH0 126 aa13.19□□□□□ -0.3
TPM4-206ENST00000587201 IGHV3OR16-13A0A075B7E8 117 aa13.18□□□□□ -0.3
TPM4-206ENST00000587201 IGHV3-74A0A0B4J1X5 117 aa13.18□□□□□ -0.3
TPM4-206ENST00000587201 NXPH3O95157 252 aa13.18□□□□□ -0.3
TPM4-206ENST00000587201 HTR2BP41595 481 aa13.18□□□□□ -0.3
TPM4-206ENST00000587201 KLF9Q13886 244 aaPredicted RBP13.18□□□□□ -0.3
TPM4-206ENST00000587201 MLANAQ16655 118 aa13.18□□□□□ -0.3
TPM4-206ENST00000587201 BSXQ3C1V8 233 aa13.18□□□□□ -0.3
TPM4-206ENST00000587201 TRIM63Q969Q1 353 aa13.18□□□□□ -0.3
TPM4-206ENST00000587201 FNDC4Q9H6D8 234 aaPredicted RBP13.18□□□□□ -0.3
TPM4-206ENST00000587201 PUS1Q9Y606 427 aaKnown RBP eCLIP13.18□□□□□ -0.3
TPM4-206ENST00000587201 IGKV3-7A0A075B6H7 116 aa13.17□□□□□ -0.3
TPM4-206ENST00000587201 CLN5O75503 358 aa13.17□□□□□ -0.3
TPM4-206ENST00000587201 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
TPM4-206ENST00000587201 SULT1A3P0DMM9 295 aa13.17□□□□□ -0.3
TPM4-206ENST00000587201 SULT1A4P0DMN0 295 aa13.17□□□□□ -0.3
TPM4-206ENST00000587201 ANXA3P12429 323 aa13.17□□□□□ -0.3
TPM4-206ENST00000587201 RBM38Q9H0Z9 239 aaKnown RBP13.17□□□□□ -0.3
TPM4-206ENST00000587201 MRPL36Q9P0J6 103 aaKnown RBP13.17□□□□□ -0.3
TPM4-206ENST00000587201 RYR3Q15413 4870 aa13.17□□□□□ -0.3
TPM4-206ENST00000587201 RPS10-NUDT3A0A1W2PQS6 291 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 BMI1P35226 326 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 TFPI2P48307 235 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
TPM4-206ENST00000587201 ZNF79Q15937 498 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 ODF3L2Q3SX64 289 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 TMED4Q7Z7H5 227 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 CCDC190Q86UF4 302 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 SLC24A4Q8NFF2 622 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 OR4X1Q8NH49 305 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 CACFD1Q9UGQ2 172 aa13.16□□□□□ -0.3
TPM4-206ENST00000587201 A0A0B4J2A0 478 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 CCR6P51684 374 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 SRPXP78539 464 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 C2orf83Q53S99 150 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 LYZL2Q7Z4W2 148 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 LGI3Q8N145 548 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 ZFAND3Q9H8U3 227 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 SHPKQ9UHJ6 478 aa13.15□□□□□ -0.3
TPM4-206ENST00000587201 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 A0A1B0GU03 582 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 ZNF701M0R085 212 aaPredicted RBP13.14□□□□□ -0.31
TPM4-206ENST00000587201 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
TPM4-206ENST00000587201 APOC4P55056 127 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 SMCO1Q147U7 214 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 FAM90A2PQ658T7 463 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 TCF24Q7RTU0 167 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 GBGT1Q8N5D6 347 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 RNASEH2CQ8TDP1 164 aaKnown RBP13.14□□□□□ -0.31
TPM4-206ENST00000587201 VSIRQ9H7M9 311 aa13.14□□□□□ -0.31
TPM4-206ENST00000587201 IGHV3-66A0A0C4DH42 116 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 CD5P06127 495 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 NPY1RP25929 384 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 CMC4P56277 68 aaPredicted RBP13.13□□□□□ -0.31
TPM4-206ENST00000587201 TNFRSF9Q07011 255 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 TIGITQ495A1 244 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 NMSQ5H8A3 153 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 SPANXN2Q5MJ10 180 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 NOXA1Q86UR1 476 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 DEDD2Q8WXF8 326 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 OVOL2Q9BRP0 275 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 STARD9Q9P2P6 4700 aa13.13□□□□□ -0.31
TPM4-206ENST00000587201 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 IFNA10P01566 189 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 SLC25A4P12235 298 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 RPL35AP18077 110 aaKnown RBP13.12□□□□□ -0.31
TPM4-206ENST00000587201 NPPCP23582 126 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 RND2P52198 227 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 TMEM128Q5BJH2 165 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 APRG1Q8IVJ8 170 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 LILRB2Q8N423 598 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 IL17DQ8TAD2 202 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 METTL26Q96S19 204 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 SLC25A21Q9BQT8 299 aaPredicted RBP13.12□□□□□ -0.31
TPM4-206ENST00000587201 HSPB7Q9UBY9 170 aa13.12□□□□□ -0.31
TPM4-206ENST00000587201 A0A1W2PS18 150 aa13.11□□□□□ -0.31
TPM4-206ENST00000587201 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
TPM4-206ENST00000587201 DFFBO76075 338 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms