RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 HAPLN4Q86UW8 402 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 OR10P1Q8NGE3 313 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 CCDC140Q96MF4 163 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 MDFIQ99750 246 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 ADARB2-AS1A8MUL3 147 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 EWSR1Q01844 656 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 C3orf56Q8N813 242 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 KLHL30-AS1Q8NEE0 82 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 TXN2Q99757 166 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 BOLA1Q9Y3E2 137 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 FNDC10F2Z333 226 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 SMLR1H3BR10 107 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 I3L521 148 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 CST7O76096 145 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 RPL12P30050 165 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 MFAP4P55083 255 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 ACOT7LQ6ZUV0 252 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 TMEM116Q8NCL8 245 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 OR4X1Q8NH49 305 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 AQP10Q96PS8 301 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
PRKCSH-203ENST00000586486 F8W735 103 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 HBG1P69891 147 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 HBG2P69892 147 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 DLK1P80370 383 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 ARL16Q0P5N6 197 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 MLANAQ16655 118 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 C18orf65Q6ZTR6 163 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 ZNF546Q86UE3 836 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 GAR1Q9NY12 217 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 TNFSF18Q9UNG2 199 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 S4R3C0 116 aa13.11□□□□□ -0.31
PRKCSH-203ENST00000586486 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 IGHV3-48P01763 117 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 S100A11P31949 105 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 SLC38A11Q08AI6 406 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 ACSM6Q6P461 480 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 SLC35E1Q96K37 410 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 OR5B12Q96R08 314 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 STAB1Q9NY15 2570 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 NPBWR1P48145 328 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 NHLH2Q02577 135 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 GAMTQ14353 236 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 TMEM217Q8N7C4 229 aa13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 BSCL2Q96G97 398 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 PEF1Q9UBV8 284 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-203ENST00000586486 A0A1W2PRX2 142 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 HMSDA8MTL9 139 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 CLN5O75503 358 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 C1QBP02746 253 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 GPR183P32249 361 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 NUP62P37198 522 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 RND2P52198 227 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 CD300CQ08708 224 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 Q56UQ5 140 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 CLEC19AQ6UXS0 136 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 C8orf86Q6ZUL3 223 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 INO80EQ8NBZ0 244 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 OR11H4Q8NGC9 324 aa13.09□□□□□ -0.31
PRKCSH-203ENST00000586486 GNG7O60262 68 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 TRBV12-3P01733 135 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 CLEC3BP05452 202 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 VWC2Q2TAL6 325 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 SPSB3Q6PJ21 355 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 UBAC2Q8NBM4 344 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 OR1S2Q8NGQ3 325 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 OR5C1Q8NGR4 320 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 ACY3Q96HD9 319 aa13.08□□□□□ -0.32
PRKCSH-203ENST00000586486 ANKRD34BA5PLL1 514 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 OR2T8A6NH00 312 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 ARPC5O15511 151 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 TGOLN2O43493 480 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 HSPB1P04792 205 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 FHL3Q13643 280 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 NSUN5P1Q3KNT7 163 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 LILRB2Q8N423 598 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 NPIPB3Q92617 1050 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 TMEM147Q9BVK8 224 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 ZC4H2Q9NQZ6 224 aa13.07□□□□□ -0.32
PRKCSH-203ENST00000586486 TRAV30A0A087WSZ9 112 aa13.06□□□□□ -0.32
PRKCSH-203ENST00000586486 BMPR1BO00238 502 aa13.06□□□□□ -0.32
PRKCSH-203ENST00000586486 SCGB2A1O75556 95 aa13.06□□□□□ -0.32
PRKCSH-203ENST00000586486 CTSGP08311 255 aa13.06□□□□□ -0.32
PRKCSH-203ENST00000586486 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
PRKCSH-203ENST00000586486 ARL3P36405 182 aa13.06□□□□□ -0.32
PRKCSH-203ENST00000586486 ZNF345Q14585 488 aa13.06□□□□□ -0.32
PRKCSH-203ENST00000586486 DEFB136Q30KP8 78 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms