RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 BSXQ3C1V8 233 aa20.96■□□□□ 0.95
LIG3-208ENST00000586407 TOMM5Q8N4H5 51 aa20.96■□□□□ 0.95
LIG3-208ENST00000586407 SCGB3A2Q96PL1 93 aa20.96■□□□□ 0.95
LIG3-208ENST00000586407 RNF2Q99496 336 aa20.96■□□□□ 0.95
LIG3-208ENST00000586407 SPAG8Q99932 426 aaPredicted RBP20.96■□□□□ 0.95
LIG3-208ENST00000586407 RHPN1-AS1Q9BWJ2 59 aa20.96■□□□□ 0.95
LIG3-208ENST00000586407 KCNIP3Q9Y2W7 256 aa20.96■□□□□ 0.95
LIG3-208ENST00000586407 KMT2CQ8NEZ4 4911 aaKnown RBP20.95■□□□□ 0.94
LIG3-208ENST00000586407 CEBPZOSA8MTT3 80 aa20.95■□□□□ 0.94
LIG3-208ENST00000586407 OPRK1P41145 380 aa20.95■□□□□ 0.94
LIG3-208ENST00000586407 TOMM20LQ6UXN7 152 aa20.95■□□□□ 0.94
LIG3-208ENST00000586407 TMED4Q7Z7H5 227 aa20.95■□□□□ 0.94
LIG3-208ENST00000586407 TMEM116Q8NCL8 245 aa20.95■□□□□ 0.94
LIG3-208ENST00000586407 OR52E5Q8NH55 327 aa20.95■□□□□ 0.94
LIG3-208ENST00000586407 OR10C1Q96KK4 312 aa20.95■□□□□ 0.94
LIG3-208ENST00000586407 HEYLQ9NQ87 328 aaPredicted RBP20.95■□□□□ 0.94
LIG3-208ENST00000586407 IGKV3-7A0A075B6H7 116 aa20.94■□□□□ 0.94
LIG3-208ENST00000586407 CHEK1O14757 476 aa20.94■□□□□ 0.94
LIG3-208ENST00000586407 TMEM50AO95807 157 aa20.94■□□□□ 0.94
LIG3-208ENST00000586407 FAUP35544 74 aaKnown RBP20.94■□□□□ 0.94
LIG3-208ENST00000586407 LAMTOR1Q6IAA8 161 aa20.94■□□□□ 0.94
LIG3-208ENST00000586407 LYZL2Q7Z4W2 148 aa20.94■□□□□ 0.94
LIG3-208ENST00000586407 CASC10Q5T4H9 136 aa20.93■□□□□ 0.94
LIG3-208ENST00000586407 ZFAND6Q6FIF0 208 aa20.93■□□□□ 0.94
LIG3-208ENST00000586407 IL22RA2Q969J5 263 aa20.93■□□□□ 0.94
LIG3-208ENST00000586407 PUS1Q9Y606 427 aaKnown RBP eCLIP20.93■□□□□ 0.94
LIG3-208ENST00000586407 A0A1B0GU03 582 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 CORTO00230 105 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 APOHP02749 345 aaPredicted RBP20.92■□□□□ 0.94
LIG3-208ENST00000586407 SULT1A3P0DMM9 295 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 SULT1A4P0DMN0 295 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 TFPI2P48307 235 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 AP3S2P59780 193 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 ODF3L2Q3SX64 289 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 TMEM170AQ8WVE7 144 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 ZFAND3Q9H8U3 227 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 DNAH7Q8WXX0 4024 aa20.92■□□□□ 0.94
LIG3-208ENST00000586407 TRAV14DV4A0A0A6YYC5 116 aa20.91■□□□□ 0.94
LIG3-208ENST00000586407 IGHV3-66A0A0C4DH42 116 aa20.91■□□□□ 0.94
LIG3-208ENST00000586407 NMSQ5H8A3 153 aa20.91■□□□□ 0.94
LIG3-208ENST00000586407 ZNF600Q6ZNG1 722 aa20.91■□□□□ 0.94
LIG3-208ENST00000586407 GGTLC1Q9BX51 225 aa20.91■□□□□ 0.94
LIG3-208ENST00000586407 ZNF701M0R085 212 aaPredicted RBP20.9■□□□□ 0.94
LIG3-208ENST00000586407 CLN5O75503 358 aa20.9■□□□□ 0.94
LIG3-208ENST00000586407 LYL1P12980 280 aa20.9■□□□□ 0.94
LIG3-208ENST00000586407 HTR2BP41595 481 aa20.9■□□□□ 0.94
LIG3-208ENST00000586407 SLC24A4Q8NFF2 622 aa20.9■□□□□ 0.94
LIG3-208ENST00000586407 ST8SIA2Q92186 375 aa20.9■□□□□ 0.94
LIG3-208ENST00000586407 SRRQ9GZT4 340 aa20.9■□□□□ 0.94
LIG3-208ENST00000586407 LOC102724200A0A096LPH7 203 aaPredicted RBP20.89■□□□□ 0.93
LIG3-208ENST00000586407 A0A0B4J2A0 478 aa20.89■□□□□ 0.93
LIG3-208ENST00000586407 TIGITQ495A1 244 aa20.89■□□□□ 0.93
LIG3-208ENST00000586407 LGI3Q8N145 548 aa20.89■□□□□ 0.93
LIG3-208ENST00000586407 LILRB2Q8N423 598 aa20.89■□□□□ 0.93
LIG3-208ENST00000586407 GBGT1Q8N5D6 347 aa20.89■□□□□ 0.93
LIG3-208ENST00000586407 GINS3Q9BRX5 216 aa20.89■□□□□ 0.93
LIG3-208ENST00000586407 SHPKQ9UHJ6 478 aa20.89■□□□□ 0.93
LIG3-208ENST00000586407 OR4C46A6NHA9 309 aa20.88■□□□□ 0.93
LIG3-208ENST00000586407 C2orf83Q53S99 150 aa20.88■□□□□ 0.93
LIG3-208ENST00000586407 SPANXN2Q5MJ10 180 aa20.88■□□□□ 0.93
LIG3-208ENST00000586407 OR4X1Q8NH49 305 aa20.88■□□□□ 0.93
LIG3-208ENST00000586407 ANXA3P12429 323 aa20.87■□□□□ 0.93
LIG3-208ENST00000586407 VAMP1P23763 118 aa20.87■□□□□ 0.93
LIG3-208ENST00000586407 SMCO1Q147U7 214 aa20.87■□□□□ 0.93
LIG3-208ENST00000586407 ZNF124Q15973 351 aa20.87■□□□□ 0.93
LIG3-208ENST00000586407 TCF24Q7RTU0 167 aa20.87■□□□□ 0.93
LIG3-208ENST00000586407 RBKSQ9H477 322 aa20.87■□□□□ 0.93
LIG3-208ENST00000586407 IGKV1-17P01599 117 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 NPY1RP25929 384 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 CCR6P51684 374 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 RND2P52198 227 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 TNFRSF9Q07011 255 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 BAK1Q16611 211 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 FAM90A2PQ658T7 463 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 PRSS54Q6PEW0 395 aa20.86■□□□□ 0.93
LIG3-208ENST00000586407 SRPXP78539 464 aa20.85■□□□□ 0.93
LIG3-208ENST00000586407 APRG1Q8IVJ8 170 aa20.85■□□□□ 0.93
LIG3-208ENST00000586407 HSPB7Q9UBY9 170 aa20.85■□□□□ 0.93
LIG3-208ENST00000586407 RPS10-NUDT3A0A1W2PQS6 291 aa20.84■□□□□ 0.93
LIG3-208ENST00000586407 RPL35AP18077 110 aaKnown RBP20.84■□□□□ 0.93
LIG3-208ENST00000586407 TMEM128Q5BJH2 165 aa20.84■□□□□ 0.93
LIG3-208ENST00000586407 WFDC3Q8IUB2 231 aa20.84■□□□□ 0.93
LIG3-208ENST00000586407 OR1S1Q8NH92 325 aa20.84■□□□□ 0.93
LIG3-208ENST00000586407 VSIRQ9H7M9 311 aa20.84■□□□□ 0.93
LIG3-208ENST00000586407 LINC00854A0A1B0GVQ3 168 aa20.83■□□□□ 0.93
LIG3-208ENST00000586407 DFFBO76075 338 aa20.83■□□□□ 0.93
LIG3-208ENST00000586407 PPP1R1AQ13522 171 aa20.83■□□□□ 0.93
LIG3-208ENST00000586407 RNASEH2CQ8TDP1 164 aaKnown RBP20.83■□□□□ 0.93
LIG3-208ENST00000586407 DTD1Q8TEA8 209 aa20.83■□□□□ 0.93
LIG3-208ENST00000586407 SLC25A21Q9BQT8 299 aaPredicted RBP20.83■□□□□ 0.93
LIG3-208ENST00000586407 IFNA10P01566 189 aa20.82■□□□□ 0.92
LIG3-208ENST00000586407 IGLC1P0CG04 106 aa20.82■□□□□ 0.92
LIG3-208ENST00000586407 SDHCQ99643 169 aaPredicted RBP20.82■□□□□ 0.92
LIG3-208ENST00000586407 OVOL2Q9BRP0 275 aa20.82■□□□□ 0.92
LIG3-208ENST00000586407 TRIQKQ629K1 86 aa20.81■□□□□ 0.92
LIG3-208ENST00000586407 ACY3Q96HD9 319 aa20.81■□□□□ 0.92
LIG3-208ENST00000586407 SLC25A4P12235 298 aa20.8■□□□□ 0.92
LIG3-208ENST00000586407 OR10J1P30954 320 aa20.8■□□□□ 0.92
LIG3-208ENST00000586407 INPP1P49441 399 aa20.8■□□□□ 0.92
LIG3-208ENST00000586407 CENPSQ8N2Z9 138 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms