RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	OR10P1	Q8NGE3	313 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	C4orf3	Q8WVX3	66 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	CACNG8	Q8WXS5	425 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	ATP6V0B	Q99437	205 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	C21orf62	Q9NYP8	219 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318		S4R3C0	116 aa		12.9	□□□□□ -0.34
TCF3-208	ENST00000586318	FXYD6-FXYD2	A0A087WZ82	144 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	ADARB2-AS1	A8MUL3	147 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318		I3L521	148 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	RPL12	P30050	165 aa	Known RBP	12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	FCGR2B	P31994	310 aa	Predicted RBP	12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	MFAP4	P55083	255 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	RUNX1	Q01196	453 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.89	□□□□□ -0.35	5e-7	■■■■□ 19.6
TCF3-208	ENST00000586318	BAX	Q07812	192 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	ARL16	Q0P5N6	197 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	SHISA2	Q6UWI4	295 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	KLHL30-AS1	Q8NEE0	82 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	CCDC140	Q96MF4	163 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318	TXN2	Q99757	166 aa		12.89	□□□□□ -0.35
TCF3-208	ENST00000586318		A0A1W2PRX2	142 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	NUDT19	A8MXV4	375 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	CST7	O76096	145 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	IGHV3-48	P01763	117 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	IGHV3-23	P01764	117 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	DLK1	P80370	383 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	ACSM6	Q6P461	480 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	ZNF546	Q86UE3	836 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	OR4X1	Q8NH49	305 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	SLC35E1	Q96K37	410 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	OR5B12	Q96R08	314 aa		12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	GAR1	Q9NY12	217 aa	Known RBP	12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	FBN1	P35555	2871 aa	Known RBP	12.88	□□□□□ -0.35
TCF3-208	ENST00000586318	FNDC10	F2Z333	226 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318		F8W735	103 aa	Predicted RBP	12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	S100A11	P31949	105 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	NUP62	P37198	522 aa	Predicted RBP	12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	NPBWR1	P48145	328 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	HBG1	P69891	147 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	HBG2	P69892	147 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	NHLH2	Q02577	135 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	SLC38A11	Q08AI6	406 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318		Q56UQ5	140 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	CLEC19A	Q6UXS0	136 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	ACOT7L	Q6ZUV0	252 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	TMEM217	Q8N7C4	229 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	TMEM116	Q8NCL8	245 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	AQP10	Q96PS8	301 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	NEURL2	Q9BR09	285 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	GGACT	Q9BVM4	153 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	MRPL36	Q9P0J6	103 aa	Known RBP	12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	PEF1	Q9UBV8	284 aa	Known RBP	12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	TNFSF18	Q9UNG2	199 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	HSPB11	Q9Y547	144 aa		12.87	□□□□□ -0.35
TCF3-208	ENST00000586318	ANKRD34B	A5PLL1	514 aa		12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	CLN5	O75503	358 aa		12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	RND2	P52198	227 aa		12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	GAMT	Q14353	236 aa		12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	NSUN5P1	Q3KNT7	163 aa		12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	C8orf86	Q6ZUL3	223 aa		12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	INO80E	Q8NBZ0	244 aa	Predicted RBP	12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	ZC4H2	Q9NQZ6	224 aa		12.86	□□□□□ -0.35
TCF3-208	ENST00000586318	GNG7	O60262	68 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	TRBV12-3	P01733	135 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	C1QB	P02746	253 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	HSPB1	P04792	205 aa	Known RBP	12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	CLEC3B	P05452	202 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	GPR183	P32249	361 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	ATP6V1F	Q16864	119 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	LILRB2	Q8N423	598 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	UBAC2	Q8NBM4	344 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	OR11H4	Q8NGC9	324 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	OR1S2	Q8NGQ3	325 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	NPIPB3	Q92617	1050 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	BSCL2	Q96G97	398 aa	Predicted RBP	12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	ACY3	Q96HD9	319 aa		12.85	□□□□□ -0.35
TCF3-208	ENST00000586318	TRAV30	A0A087WSZ9	112 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	RNF222	A6NCQ9	220 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	OR2T8	A6NH00	312 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	HMSD	A8MTL9	139 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	TGOLN2	O43493	480 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	ARL3	P36405	182 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	CD300C	Q08708	224 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	VWC2	Q2TAL6	325 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	SPSB3	Q6PJ21	355 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	TMEM144	Q7Z5S9	345 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	OR5C1	Q8NGR4	320 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	TMEM147	Q9BVK8	224 aa		12.84	□□□□□ -0.35
TCF3-208	ENST00000586318	IGHV4OR15-8	A0A075B7B6	117 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318		A0A087WW49	117 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	SMCO3	A2RU48	225 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	PPP5D1	E7EU14	171 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	LINC01619	G3V211	115 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	BMPR1B	O00238	502 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	NUPL2	O15504	423 aa	Known RBP	12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	ARPC5	O15511	151 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	SCGB2A1	O75556	95 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	AKR1C1	Q04828	323 aa		12.83	□□□□□ -0.36
TCF3-208	ENST00000586318	DEFB136	Q30KP8	78 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms