RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 Q6ZTC4 211 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 LINC00336Q6ZUF6 198 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 DCANP1Q8TF63 244 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 Q9H521 79 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.73
SDF2-202ENST00000585428 RABAC1Q9UI14 185 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
SDF2-202ENST00000585428 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
SDF2-202ENST00000585428 A0A1B0GVY2 172 aa10.45□□□□□ -0.74
SDF2-202ENST00000585428 A6NJY4 79 aa10.45□□□□□ -0.74
SDF2-202ENST00000585428 IGKV1-5P01602 117 aa10.45□□□□□ -0.74
SDF2-202ENST00000585428 SPINK9Q5DT21 86 aa10.45□□□□□ -0.74
SDF2-202ENST00000585428 FNDC4Q9H6D8 234 aaPredicted RBP10.45□□□□□ -0.74
SDF2-202ENST00000585428 TMEM231Q9H6L2 316 aa10.45□□□□□ -0.74
SDF2-202ENST00000585428 DNAH6Q9C0G6 4158 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 KNCNA6PVL3 124 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 CLN5O75503 358 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 RNASE2P10153 161 aaKnown RBP10.44□□□□□ -0.74
SDF2-202ENST00000585428 C4BPBP20851 252 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 RPL5P46777 297 aaKnown RBP10.44□□□□□ -0.74
SDF2-202ENST00000585428 PPP5CP53041 499 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 RND3P61587 244 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 OR4X1Q8NH49 305 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 RNF126Q9BV68 326 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 SCPEP1Q9HB40 452 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 U3KQE9 123 aa10.44□□□□□ -0.74
SDF2-202ENST00000585428 CORTO00230 105 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 IGKV1-17P01599 117 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 ETV6P41212 452 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 P2RY1P47900 373 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 SUB1P53999 127 aaKnown RBP eCLIP10.43□□□□□ -0.74
SDF2-202ENST00000585428 C12orf74Q32Q52 190 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 STXBP6Q8NFX7 210 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 YIPF6Q96EC8 236 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 METTL26Q96S19 204 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 RAB40CQ96S21 281 aa10.43□□□□□ -0.74
SDF2-202ENST00000585428 SMIM31A0A1B0GVY4 71 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 ATP6V1G2O95670 118 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 IFNA17P01571 189 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 BSXQ3C1V8 233 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 ACTL10Q5JWF8 245 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 TMEM230Q96A57 120 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 ZNF486Q96H40 463 aaPredicted RBP10.42□□□□□ -0.74
SDF2-202ENST00000585428 TP53RKQ96S44 253 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 CLEC5AQ9NY25 188 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 TBC1D24Q9ULP9 559 aa10.42□□□□□ -0.74
SDF2-202ENST00000585428 APOA1P02647 267 aa10.41□□□□□ -0.74
SDF2-202ENST00000585428 RCVRNP35243 200 aa10.41□□□□□ -0.74
SDF2-202ENST00000585428 LSM3P62310 102 aaKnown RBP10.41□□□□□ -0.74
SDF2-202ENST00000585428 KCTD21Q4G0X4 260 aa10.41□□□□□ -0.74
SDF2-202ENST00000585428 LHFPL1Q86WI0 220 aa10.41□□□□□ -0.74
SDF2-202ENST00000585428 POM121L12Q8N7R1 296 aa10.41□□□□□ -0.74
SDF2-202ENST00000585428 SLC35G3Q8N808 338 aa10.41□□□□□ -0.74
SDF2-202ENST00000585428 CELA1Q9UNI1 258 aa10.41□□□□□ -0.74
SDF2-202ENST00000585428 TRAV30A0A087WSZ9 112 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 DEFB131BA0A096LNP1 70 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 C3orf85A0A1B0GTC6 90 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 M0QYG6 137 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 RTL8CO15255 209 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 MED14OSP0DP75 135 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 PI3P19957 117 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 PIGPP57054 158 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 AARDQ4LEZ3 155 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 C16orf54Q6UWD8 224 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 Q6ZRM9 215 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 SNX29P2Q8IUI4 249 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 CENPSQ8N2Z9 138 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 COMMD3Q9UBI1 195 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 RYR1P21817 5038 aa10.4□□□□□ -0.74
SDF2-202ENST00000585428 A0A0G2JRQ6 117 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 ATG12O94817 140 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 AMBPP02760 352 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 PGAM2P15259 253 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 ELK1P19419 428 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 OPRK1P41145 380 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 AP2S1P53680 142 aaPredicted RBP10.39□□□□□ -0.75
SDF2-202ENST00000585428 DHRS2Q13268 280 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 SP6Q3SY56 376 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 TIGITQ495A1 244 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 GLMPQ8WWB7 406 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 SEPSECSQ9HD40 501 aaKnown RBP10.39□□□□□ -0.75
SDF2-202ENST00000585428 KLK11Q9UBX7 282 aa10.39□□□□□ -0.75
SDF2-202ENST00000585428 HELTA6NFD8 242 aa10.38□□□□□ -0.75
SDF2-202ENST00000585428 P0DMU3 169 aa10.38□□□□□ -0.75
SDF2-202ENST00000585428 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
SDF2-202ENST00000585428 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
SDF2-202ENST00000585428 YPEL3P61236 119 aaPredicted RBP10.38□□□□□ -0.75
SDF2-202ENST00000585428 ZNF767PQ75MW2 155 aa10.38□□□□□ -0.75
SDF2-202ENST00000585428 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
SDF2-202ENST00000585428 PDCD10Q9BUL8 212 aa10.38□□□□□ -0.75
SDF2-202ENST00000585428 SCRT1Q9BWW7 348 aa10.38□□□□□ -0.75
SDF2-202ENST00000585428 FAT2Q9NYQ8 4349 aa10.37□□□□□ -0.75
SDF2-202ENST00000585428 AGRNO00468 2067 aa10.37□□□□□ -0.75
SDF2-202ENST00000585428 PRSS29PA6NIE9 313 aa10.37□□□□□ -0.75
SDF2-202ENST00000585428 H3BMM0 161 aa10.37□□□□□ -0.75
SDF2-202ENST00000585428 HNRNPCP07910 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
SDF2-202ENST00000585428 IGLC1P0CG04 106 aa10.37□□□□□ -0.75
SDF2-202ENST00000585428 UCP1P25874 307 aa10.37□□□□□ -0.75
SDF2-202ENST00000585428 HOXA1P49639 335 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms