RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 CCDC140Q96MF4 163 aa17.71■□□□□ 0.43
LSM7-202ENST00000585395 GSKIPQ9P0R6 139 aa17.71■□□□□ 0.43
LSM7-202ENST00000585395 S4R3C0 116 aa17.71■□□□□ 0.43
LSM7-202ENST00000585395 I3L2K1 104 aa17.7■□□□□ 0.42
LSM7-202ENST00000585395 GPR183P32249 361 aa17.7■□□□□ 0.42
LSM7-202ENST00000585395 RGS21Q2M5E4 152 aa17.7■□□□□ 0.42
LSM7-202ENST00000585395 FAM106AQ4KMX7 169 aa17.7■□□□□ 0.42
LSM7-202ENST00000585395 OR4D5Q8NGN0 318 aa17.7■□□□□ 0.42
LSM7-202ENST00000585395 PEMTQ9UBM1 199 aa17.7■□□□□ 0.42
LSM7-202ENST00000585395 BMPR1BO00238 502 aa17.69■□□□□ 0.42
LSM7-202ENST00000585395 TRBV12-3P01733 135 aa17.69■□□□□ 0.42
LSM7-202ENST00000585395 FCGR2BP31994 310 aaPredicted RBP17.69■□□□□ 0.42
LSM7-202ENST00000585395 ID3Q02535 119 aa17.69■□□□□ 0.42
LSM7-202ENST00000585395 ACSM6Q6P461 480 aa17.69■□□□□ 0.42
LSM7-202ENST00000585395 UBAC2Q8NBM4 344 aa17.69■□□□□ 0.42
LSM7-202ENST00000585395 OR4C12Q96R67 309 aa17.69■□□□□ 0.42
LSM7-202ENST00000585395 IGHV3-21A0A0B4J1V1 117 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 PPP5D1E7EU14 171 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 NUPL2O15504 423 aaKnown RBP17.68■□□□□ 0.42
LSM7-202ENST00000585395 TGOLN2O43493 480 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 GNG7O60262 68 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 SCGB1D2O95969 90 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 IFNA4P05014 189 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 SLC25A4P12235 298 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 KLF5Q13887 457 aaPredicted RBP17.68■□□□□ 0.42
LSM7-202ENST00000585395 OR10C1Q96KK4 312 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 C2orf50Q96LR7 162 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 MAGT1Q9H0U3 335 aa17.68■□□□□ 0.42
LSM7-202ENST00000585395 MPTX1A8MV57 137 aa17.67■□□□□ 0.42
LSM7-202ENST00000585395 CCSO14618 274 aa17.67■□□□□ 0.42
LSM7-202ENST00000585395 SSNA1O43805 119 aa17.67■□□□□ 0.42
LSM7-202ENST00000585395 IAPPP10997 89 aa17.67■□□□□ 0.42
LSM7-202ENST00000585395 GPHB5Q86YW7 130 aa17.67■□□□□ 0.42
LSM7-202ENST00000585395 PRR25Q96S07 402 aa17.67■□□□□ 0.42
LSM7-202ENST00000585395 RAB40CQ96S21 281 aa17.67■□□□□ 0.42
LSM7-202ENST00000585395 OR2T8A6NH00 312 aa17.66■□□□□ 0.42
LSM7-202ENST00000585395 SYNJ2BPP57105 145 aa17.66■□□□□ 0.42
LSM7-202ENST00000585395 RELQ04864 619 aaPredicted RBP17.66■□□□□ 0.42
LSM7-202ENST00000585395 ZNF256Q9Y2P7 627 aaPredicted RBP17.66■□□□□ 0.42
LSM7-202ENST00000585395 OR2C1O95371 312 aa17.65■□□□□ 0.42
LSM7-202ENST00000585395 POLR2GP62487 172 aaKnown RBP eCLIP17.65■□□□□ 0.42
LSM7-202ENST00000585395 OR9G4Q8NGQ1 327 aa17.65■□□□□ 0.42
LSM7-202ENST00000585395 PAIP2BQ9ULR5 123 aaKnown RBP17.65■□□□□ 0.42
LSM7-202ENST00000585395 STRAPQ9Y3F4 350 aaKnown RBP17.65■□□□□ 0.42
LSM7-202ENST00000585395 DNAH9Q9NYC9 4486 aa17.65■□□□□ 0.42
LSM7-202ENST00000585395 TRAV30A0A087WSZ9 112 aa17.64■□□□□ 0.41
LSM7-202ENST00000585395 L7N2F9 121 aa17.64■□□□□ 0.41
LSM7-202ENST00000585395 LGALS9O00182 355 aa17.64■□□□□ 0.41
LSM7-202ENST00000585395 SSSCA1O60232 199 aa17.64■□□□□ 0.41
LSM7-202ENST00000585395 SPNP16150 400 aa17.64■□□□□ 0.41
LSM7-202ENST00000585395 PVALBP20472 110 aaPredicted RBP17.64■□□□□ 0.41
LSM7-202ENST00000585395 VAMP2P63027 116 aa17.64■□□□□ 0.41
LSM7-202ENST00000585395 CYCSP99999 105 aaKnown RBP17.64■□□□□ 0.41
LSM7-202ENST00000585395 CD69Q07108 199 aa17.64■□□□□ 0.41
LSM7-202ENST00000585395 C7orf66A4D0T2 115 aa17.63■□□□□ 0.41
LSM7-202ENST00000585395 GOSR2O14653 212 aa17.63■□□□□ 0.41
LSM7-202ENST00000585395 GPX4P36969 197 aaPredicted RBP17.63■□□□□ 0.41
LSM7-202ENST00000585395 TAS2R30P59541 319 aa17.63■□□□□ 0.41
LSM7-202ENST00000585395 OR4X1Q8NH49 305 aa17.63■□□□□ 0.41
LSM7-202ENST00000585395 SMIM8Q96KF7 97 aa17.63■□□□□ 0.41
LSM7-202ENST00000585395 PSENENQ9NZ42 101 aa17.63■□□□□ 0.41
LSM7-202ENST00000585395 ZNF320A2RRD8 509 aa17.62■□□□□ 0.41
LSM7-202ENST00000585395 SPANXN5Q5MJ07 72 aa17.62■□□□□ 0.41
LSM7-202ENST00000585395 CACNG8Q8WXS5 425 aa17.62■□□□□ 0.41
LSM7-202ENST00000585395 SLC35E1Q96K37 410 aa17.62■□□□□ 0.41
LSM7-202ENST00000585395 UFC1Q9Y3C8 167 aa17.62■□□□□ 0.41
LSM7-202ENST00000585395 NDUFA4O00483 81 aa17.61■□□□□ 0.41
LSM7-202ENST00000585395 TSC22D2O75157 780 aa17.61■□□□□ 0.41
LSM7-202ENST00000585395 CLN5O75503 358 aa17.61■□□□□ 0.41
LSM7-202ENST00000585395 SCAF4O95104 1147 aaKnown RBP17.61■□□□□ 0.41
LSM7-202ENST00000585395 SLC16A13Q7RTY0 426 aa17.61■□□□□ 0.41
LSM7-202ENST00000585395 B9D2Q9BPU9 175 aa17.61■□□□□ 0.41
LSM7-202ENST00000585395 FNDC4Q9H6D8 234 aaPredicted RBP17.61■□□□□ 0.41
LSM7-202ENST00000585395 ZC4H2Q9NQZ6 224 aa17.61■□□□□ 0.41
LSM7-202ENST00000585395 C15orf62A8K5M9 175 aa17.6■□□□□ 0.41
LSM7-202ENST00000585395 IGHV3-48P01763 117 aa17.6■□□□□ 0.41
LSM7-202ENST00000585395 MBPP02686 304 aaPredicted RBP17.6■□□□□ 0.41
LSM7-202ENST00000585395 CTSGP08311 255 aa17.6■□□□□ 0.41
LSM7-202ENST00000585395 ELLP55199 621 aaPredicted RBP17.6■□□□□ 0.41
LSM7-202ENST00000585395 TMEM170AQ8WVE7 144 aa17.6■□□□□ 0.41
LSM7-202ENST00000585395 ZNF436Q9C0F3 470 aaPredicted RBP17.6■□□□□ 0.41
LSM7-202ENST00000585395 SIGLEC8Q9NYZ4 499 aa17.6■□□□□ 0.41
LSM7-202ENST00000585395 LSM5Q9Y4Y9 91 aaKnown RBP17.6■□□□□ 0.41
LSM7-202ENST00000585395 F8W735 103 aaPredicted RBP17.59■□□□□ 0.41
LSM7-202ENST00000585395 TMEM50AO95807 157 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 RLN2P04090 185 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 S100A10P60903 97 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 TMEM116Q8NCL8 245 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 OR1S2Q8NGQ3 325 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 MARC2Q969Z3 335 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 CHRDL1Q9BU40 450 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 NMES1Q9C002 83 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 RCL1Q9Y2P8 373 aaKnown RBP17.59■□□□□ 0.41
LSM7-202ENST00000585395 ALG5Q9Y673 324 aa17.59■□□□□ 0.41
LSM7-202ENST00000585395 SORL1Q92673 2214 aa17.58■□□□□ 0.4
LSM7-202ENST00000585395 A8MWP6 167 aa17.58■□□□□ 0.4
LSM7-202ENST00000585395 H3BP45 60 aa17.58■□□□□ 0.4
LSM7-202ENST00000585395 RND2P52198 227 aa17.58■□□□□ 0.4
LSM7-202ENST00000585395 PRSS54Q6PEW0 395 aa17.58■□□□□ 0.4
LSM7-202ENST00000585395 ZNF600Q6ZNG1 722 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms