RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 LINC00336Q6ZUF6 198 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 TMEM116Q8NCL8 245 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 DUSP18Q8NEJ0 188 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 OR4D10Q8NGI6 311 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 OR13C8Q8NGS7 320 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 OVOL2Q9BRP0 275 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 RHPN1-AS1Q9BWJ2 59 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 C6orf62Q9GZU0 229 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-206ENST00000584112 MIXL1Q9H2W2 232 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 ENY2Q9NPA8 101 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 UBQLN2Q9UHD9 624 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 C14orf166Q9Y224 244 aaKnown RBP8.25□□□□□ -1.09
CCDC47-206ENST00000584112 TRAV14DV4A0A0A6YYC5 116 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 A0A0B4J293 547 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 KIR2DL5BA0A0G2JN68 375 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 KIR2DL5BA0A0G2JPC4 375 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 DISC1C4P0D8 188 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 CHEK1O14757 476 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 ST8SIA3O43173 380 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 SCGB2A1O75556 95 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 HOXA1P49639 335 aaPredicted RBP8.24□□□□□ -1.09
CCDC47-206ENST00000584112 SURF2Q15527 256 aaPredicted RBP8.24□□□□□ -1.09
CCDC47-206ENST00000584112 IZUMO4Q1ZYL8 232 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 ODF3L2Q3SX64 289 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 SPINK9Q5DT21 86 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 Q6ZWC4 215 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 WFDC3Q8IUB2 231 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 FAM219AQ8IW50 185 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 KIR2DL5AQ8N109 375 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 KIR2DL5BQ8NHK3 375 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 MARCH1Q8TCQ1 289 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 RAB2BQ8WUD1 216 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 SMIM4Q8WVI0 70 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 GALNT14Q96FL9 552 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 RNF2Q99496 336 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 BCL7BQ9BQE9 202 aa8.24□□□□□ -1.09
CCDC47-206ENST00000584112 TEX13DA0A0J9YY54 714 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-206ENST00000584112 CXorf65A6NEN9 183 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 J3QL48 77 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 CTDSP2O14595 271 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 IGHV3-48P01763 117 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 AKAIN1P0CW23 69 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 PAFAH1B2P68402 229 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 IL18Q14116 193 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 SPCS2Q15005 226 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 SP6Q3SY56 376 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 ZNF600Q6ZNG1 722 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 CLVS1Q8IUQ0 354 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-206ENST00000584112 STPG3Q8N7X2 389 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 DIRAS2Q96HU8 199 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 TMEM222Q9H0R3 208 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 TMEM231Q9H6L2 316 aa8.23□□□□□ -1.09
CCDC47-206ENST00000584112 CCDC59Q9P031 241 aaKnown RBP8.23□□□□□ -1.09
CCDC47-206ENST00000584112 CTDSPLO15194 276 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 SPRY2O43597 315 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 NOL3O60936 208 aaKnown RBP8.22□□□□□ -1.09
CCDC47-206ENST00000584112 CDS2O95674 445 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 OR5AC1P0C628 307 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 RNASE2P10153 161 aaKnown RBP8.22□□□□□ -1.09
CCDC47-206ENST00000584112 OPRK1P41145 380 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 ETV6P41212 452 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 TMBIM6P55061 237 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 SPCS3P61009 180 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 DHODHQ02127 395 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 LGALS9CQ6DKI2 356 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 PVRIGQ6DKI7 326 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 TOMM20LQ6UXN7 152 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 RBPMSQ93062 196 aaKnown RBP8.22□□□□□ -1.09
CCDC47-206ENST00000584112 ZNF414Q96IQ9 312 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 PRRT1Q99946 306 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 NAA60Q9H7X0 242 aa8.22□□□□□ -1.09
CCDC47-206ENST00000584112 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.22□□□□□ -1.09
CCDC47-206ENST00000584112 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 TMEM50AO95807 157 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 HTR2BP41595 481 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 RPL5P46777 297 aaKnown RBP8.21□□□□□ -1.1
CCDC47-206ENST00000584112 TNFRSF9Q07011 255 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 AARDQ4LEZ3 155 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 FAM90A2PQ658T7 463 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 FAAP20Q6NZ36 180 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 TCF24Q7RTU0 167 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 OR4C16Q8NGL9 310 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 OR52E5Q8NH55 327 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 DYNC2LI1Q8TCX1 351 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 GLYATL2Q8WU03 294 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 RNF183Q96D59 192 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 RTBDNQ9BSG5 229 aaPredicted RBP8.21□□□□□ -1.1
CCDC47-206ENST00000584112 VSIRQ9H7M9 311 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 MAP6D1Q9H9H5 199 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 CACFD1Q9UGQ2 172 aa8.21□□□□□ -1.1
CCDC47-206ENST00000584112 RSL24D1Q9UHA3 163 aaKnown RBP8.21□□□□□ -1.1
CCDC47-206ENST00000584112 PUS1Q9Y606 427 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC47-206ENST00000584112 IGKV3-7A0A075B6H7 116 aa8.2□□□□□ -1.1
CCDC47-206ENST00000584112 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
CCDC47-206ENST00000584112 TRAV30A0A087WSZ9 112 aa8.2□□□□□ -1.1
CCDC47-206ENST00000584112 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
CCDC47-206ENST00000584112 A0A0G2JRQ6 117 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms