RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 E9PCH4 1651 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 A0A1W2PPM0 123 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 HLA-DRB1P01911 266 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 MPV17LQ2QL34 196 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 SOSTDC1Q6X4U4 206 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 C20orf196Q8IYI0 205 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 HIST3H2BBQ8N257 126 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 H1FXQ92522 213 aaKnown RBP0.31□□□□□ -2.36
SKA2-210ENST00000584089 BORCS5Q969J3 196 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 NIPSNAP1Q9BPW8 284 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 SLC39A9Q9NUM3 307 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 ERGIC3Q9Y282 383 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 MAP3K5Q99683 1374 aa0.31□□□□□ -2.36
SKA2-210ENST00000584089 FRAS1Q86XX4 4008 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 PQLC2LA1A4F0 135 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 BUB1B-PAK6H3BSN5 160 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 NCR3O14931 201 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 SULT1B1O43704 296 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 PROSCO94903 275 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 MGST1P10620 155 aaKnown RBP0.3□□□□□ -2.36
SKA2-210ENST00000584089 ZNF25P17030 456 aaPredicted RBP0.3□□□□□ -2.36
SKA2-210ENST00000584089 SNRPD2P62316 118 aaKnown RBP0.3□□□□□ -2.36
SKA2-210ENST00000584089 SRSF6Q13247 344 aaKnown RBP0.3□□□□□ -2.36
SKA2-210ENST00000584089 HIST3H3Q16695 136 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 HIST2H3PS2Q5TEC6 136 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 TMEM86BQ8N661 226 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 OR10J5Q8NHC4 309 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 C4orf3Q8WVX3 66 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 OR52E6Q96RD3 313 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 C11orf68Q9H3H3 251 aaKnown RBP0.3□□□□□ -2.36
SKA2-210ENST00000584089 CDC42SE1Q9NRR8 79 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 NKIRAS1Q9NYS0 192 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 HS3ST2Q9Y278 367 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 ATP6V1DQ9Y5K8 247 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 SBF1O95248 1867 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 DOCK3Q8IZD9 2030 aa0.3□□□□□ -2.36
SKA2-210ENST00000584089 ECM29Q5VYK3 1845 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 MAST4O15021 2626 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 TRAV9-1A0A075B6T8 112 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 PSMD12O00232 456 aaPredicted RBP0.29□□□□□ -2.36
SKA2-210ENST00000584089 PSME3P61289 254 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 C3orf56Q8N813 242 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 PTH2Q96A98 100 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 C10orf95Q9H7T3 257 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 NHP2Q9NX24 153 aaKnown RBP0.29□□□□□ -2.36
SKA2-210ENST00000584089 TMEM56-RWDD3S4R434 201 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 NAV3Q8IVL0 2385 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 NUP155O75694 1391 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 MTUS2Q5JR59 1369 aa0.29□□□□□ -2.36
SKA2-210ENST00000584089 ASCC3Q8N3C0 2202 aaKnown RBP0.29□□□□□ -2.36
SKA2-210ENST00000584089 EXOC1LA0A1B0GW35 172 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 ZNF736B4DX44 427 aaPredicted RBP0.28□□□□□ -2.36
SKA2-210ENST00000584089 TGOLN2O43493 480 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 TPM3P06753 285 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 CD79AP11912 226 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 HIST1H1TP22492 207 aaPredicted RBP0.28□□□□□ -2.36
SKA2-210ENST00000584089 CDC42P60953 191 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 TEX261Q6UWH6 196 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 SLC35A3Q9Y2D2 325 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 U3KQ87 197 aa0.28□□□□□ -2.36
SKA2-210ENST00000584089 COL1A1P02452 1464 aaPredicted RBP0.28□□□□□ -2.37
SKA2-210ENST00000584089 FAAHO00519 579 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 CALB1P05937 261 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 SPCS3P61009 180 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 OR2F1Q13607 317 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 ANKRD29Q8N6D5 301 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 ITFG2Q969R8 447 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 GPR146Q96CH1 333 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 MRPS26Q9BYN8 205 aaKnown RBP0.27□□□□□ -2.37
SKA2-210ENST00000584089 TAF1LQ8IZX4 1826 aa0.27□□□□□ -2.37
SKA2-210ENST00000584089 CASP8AP2Q9UKL3 1982 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 CCDC160A6NGH7 325 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 OR2J2O76002 312 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 RPL5P46777 297 aaKnown RBP0.26□□□□□ -2.37
SKA2-210ENST00000584089 MAGOHP61326 146 aaKnown RBP0.26□□□□□ -2.37
SKA2-210ENST00000584089 TPM4P67936 248 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 DEFB113Q30KQ7 82 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 TRAPPC6BQ86SZ2 158 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 OR13D1Q8NGV5 346 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 TSPAN32Q96QS1 320 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 LLPHQ9BRT6 129 aaKnown RBP0.26□□□□□ -2.37
SKA2-210ENST00000584089 C20orf27Q9GZN8 174 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 OSTCQ9NRP0 149 aa0.26□□□□□ -2.37
SKA2-210ENST00000584089 ZNF106Q9H2Y7 1883 aaKnown RBP0.26□□□□□ -2.37
SKA2-210ENST00000584089 SNAPC4Q5SXM2 1469 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 WRNQ14191 1432 aaPredicted RBP eCLIP0.25□□□□□ -2.37
SKA2-210ENST00000584089 TNNC2P02585 160 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 HIST1H1EP10412 219 aaKnown RBP0.25□□□□□ -2.37
SKA2-210ENST00000584089 EFNA4P52798 201 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 SPOPLQ6IQ16 392 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 PATE1Q8WXA2 126 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 PPP1R2P1Q96PQ5 205 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 DCSTAMPQ9H295 470 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 KIAA1549Q9HCM3 1950 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 PLXND1Q9Y4D7 1925 aa0.25□□□□□ -2.37
SKA2-210ENST00000584089 NEO1Q92859 1461 aa0.24□□□□□ -2.37
SKA2-210ENST00000584089 TRAV3A0A0B4J244 114 aa0.24□□□□□ -2.37
SKA2-210ENST00000584089 CETN3O15182 167 aa0.24□□□□□ -2.37
SKA2-210ENST00000584089 CCL25O15444 150 aa0.24□□□□□ -2.37
SKA2-210ENST00000584089 PRH1P02810 166 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms