RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 ZNF580Q9UK33 172 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 LSM5Q9Y4Y9 91 aaKnown RBP6.48□□□□□ -1.37
ERBB2-216ENST00000584014 F11RQ9Y624 299 aaKnown RBP6.48□□□□□ -1.37
ERBB2-216ENST00000584014 IGHV4OR15-8A0A075B7B6 117 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 A0A087WW49 117 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 FAM223BA6NKX1 122 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 H3BP45 60 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 MED6O75586 246 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 IFNA4P05014 189 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 CRYGCP07315 174 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 CD33P20138 364 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 TAGLN2P37802 199 aaKnown RBP6.47□□□□□ -1.37
ERBB2-216ENST00000584014 SLURP1P55000 103 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 MFAP2P55001 183 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 S100A10P60903 97 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 KIAA0141Q14154 515 aaPredicted RBP6.47□□□□□ -1.37
ERBB2-216ENST00000584014 FAM223AQ8IWN6 122 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 OR52E5Q8NH55 327 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 EEF1AKMT3Q96AZ1 226 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 USMG5Q96IX5 58 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 TREM1Q9NP99 234 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 MGAT4CQ9UBM8 478 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 PEF1Q9UBV8 284 aaKnown RBP6.47□□□□□ -1.37
ERBB2-216ENST00000584014 ALG5Q9Y673 324 aa6.47□□□□□ -1.37
ERBB2-216ENST00000584014 IGLV11-55A0A075B6I3 123 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 IGHV3-35A0A0C4DH35 117 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 SNRPGP15A8MWD9 76 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 PPP5D1E7EU14 171 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 SYNGR2O43760 224 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 MT-CO2P00403 227 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 TRBV12-3P01733 135 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 HSPB1P04792 205 aaKnown RBP6.46□□□□□ -1.38
ERBB2-216ENST00000584014 LGALS1P09382 135 aaKnown RBP6.46□□□□□ -1.38
ERBB2-216ENST00000584014 RNASE2P10153 161 aaKnown RBP6.46□□□□□ -1.38
ERBB2-216ENST00000584014 NPY1RP25929 384 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 GPR183P32249 361 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 OPRK1P41145 380 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 BCAP31P51572 246 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 ZNF616Q08AN1 781 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 LRRC37A5PQ49AS3 106 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 TOR2AQ5JU69 321 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 SPANXN5Q5MJ07 72 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 ACSM6Q6P461 480 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 ETV3LQ6ZN32 361 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 OR1L6Q8NGR2 347 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 OR1P1Q8NH06 330 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 CXorf58Q96LI9 332 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 C2orf50Q96LR7 162 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 MED28Q9H204 178 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 HSPB7Q9UBY9 170 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 CACFD1Q9UGQ2 172 aa6.46□□□□□ -1.38
ERBB2-216ENST00000584014 TRBV9A0A0B4J1U6 114 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 OR2T8A6NH00 312 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 LINC01619G3V211 115 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 PITX3O75364 302 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 OR2C1O95371 312 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 OR8U8P0C7N1 319 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 SLC25A6P12236 298 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 MYCNOSP40205 109 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 MLANAQ16655 118 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 RPEL1Q2QD12 228 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 ZNF343Q6P1L6 599 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 MYOZ3Q8TDC0 251 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 SCARB1Q8WTV0 552 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 RANGRFQ9HD47 186 aaPredicted RBP6.45□□□□□ -1.38
ERBB2-216ENST00000584014 C21orf62Q9NYP8 219 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 PSENENQ9NZ42 101 aa6.45□□□□□ -1.38
ERBB2-216ENST00000584014 RCL1Q9Y2P8 373 aaKnown RBP6.45□□□□□ -1.38
ERBB2-216ENST00000584014 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 TRBV7-1A0A0A6YYK4 115 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 FAM90A26D6RGX4 464 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 F8WDY8 70 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 I3L521 148 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 GNG7O60262 68 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 MBPP02686 304 aaPredicted RBP6.44□□□□□ -1.38
ERBB2-216ENST00000584014 IGLL1P15814 213 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 PVALBP20472 110 aaPredicted RBP6.44□□□□□ -1.38
ERBB2-216ENST00000584014 HOXD3P31249 432 aaPredicted RBP6.44□□□□□ -1.38
ERBB2-216ENST00000584014 FHITP49789 147 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 MFAP4P55083 255 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 RAB11AP62491 216 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 OR8G2PQ6IF36 304 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 NOXA1Q86UR1 476 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 OR4D5Q8NGN0 318 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 DCUN1D4Q92564 292 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 DLX4Q92988 240 aaPredicted RBP6.44□□□□□ -1.38
ERBB2-216ENST00000584014 ACY3Q96HD9 319 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 CIB3Q96Q77 187 aaPredicted RBP6.44□□□□□ -1.38
ERBB2-216ENST00000584014 STRAPQ9Y3F4 350 aaKnown RBP6.44□□□□□ -1.38
ERBB2-216ENST00000584014 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 U3KQ87 197 aa6.44□□□□□ -1.38
ERBB2-216ENST00000584014 IGHV3OR16-8A0A075B7F1 116 aa6.43□□□□□ -1.38
ERBB2-216ENST00000584014 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.43□□□□□ -1.38
ERBB2-216ENST00000584014 RPS10-NUDT3A0A1W2PQS6 291 aa6.43□□□□□ -1.38
ERBB2-216ENST00000584014 SMCO3A2RU48 225 aa6.43□□□□□ -1.38
ERBB2-216ENST00000584014 K7EIM0 57 aa6.43□□□□□ -1.38
ERBB2-216ENST00000584014 K7EPK0 472 aa6.43□□□□□ -1.38
ERBB2-216ENST00000584014 CORTO00230 105 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms