RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 GTSCR1Q86UQ5 136 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 OR1L6Q8NGR2 347 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 EEF1AKMT3Q96AZ1 226 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 PINX1Q96BK5 328 aaKnown RBP11.83□□□□□ -0.52
SKA2-209ENST00000583976 MARVELD1Q9BSK0 173 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 HSPB7Q9UBY9 170 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 INS-IGF2F8WCM5 200 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 BMPR1BO00238 502 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 RNASE2P10153 161 aaKnown RBP11.82□□□□□ -0.52
SKA2-209ENST00000583976 SUB1P53999 127 aaKnown RBP eCLIP11.82□□□□□ -0.52
SKA2-209ENST00000583976 KLK9Q2XQG4 91 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 CLEC19AQ6UXS0 136 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 ZNF114Q8NC26 417 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 DTD1Q8TEA8 209 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 OR10C1Q96KK4 312 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 MAGT1Q9H0U3 335 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 HIPK2Q9H2X6 1198 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 TUBA4BQ9H853 241 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 GPN1Q9HCN4 374 aaPredicted RBP11.82□□□□□ -0.52
SKA2-209ENST00000583976 ZC4H2Q9NQZ6 224 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 GSKIPQ9P0R6 139 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 KLK9Q9UKQ9 250 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
SKA2-209ENST00000583976 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 PTTG1O95997 202 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 IGHV3-48P01763 117 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 IAPPP10997 89 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 CD81P60033 236 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 IAH1Q2TAA2 248 aaPredicted RBP11.81□□□□□ -0.52
SKA2-209ENST00000583976 CXorf58Q96LI9 332 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 CCDC140Q96MF4 163 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 CACFD1Q9UGQ2 172 aa11.81□□□□□ -0.52
SKA2-209ENST00000583976 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.8□□□□□ -0.52
SKA2-209ENST00000583976 C5orf51A6NDU8 294 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 K7EIM0 57 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 PRAF2O60831 178 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 SCGB1D2O95969 90 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 CD7P09564 240 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 HTR2BP41595 481 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 CD300EQ496F6 205 aaPredicted RBP11.8□□□□□ -0.52
SKA2-209ENST00000583976 UBAC2Q8NBM4 344 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 SCARB1Q8WTV0 552 aa11.8□□□□□ -0.52
SKA2-209ENST00000583976 TRBV7-1A0A0A6YYK4 115 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 SNRPGP15A8MWD9 76 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 FAM90A26D6RGX4 464 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 WRBO00258 174 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 MED6O75586 246 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 MT-CO2P00403 227 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 IFNA10P01566 189 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 CLEC3BP05452 202 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 GPR183P32249 361 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 LINC00322Q6ZN03 302 aaPredicted RBP11.79□□□□□ -0.52
SKA2-209ENST00000583976 DEFB125Q8N687 156 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 ZBTB8BQ8NAP8 495 aaPredicted RBP11.79□□□□□ -0.52
SKA2-209ENST00000583976 SLC24A4Q8NFF2 622 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 OR4D5Q8NGN0 318 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 C21orf62Q9NYP8 219 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 SIGLEC8Q9NYZ4 499 aa11.79□□□□□ -0.52
SKA2-209ENST00000583976 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
SKA2-209ENST00000583976 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
SKA2-209ENST00000583976 I3L2K1 104 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 SYNGR2O43760 224 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 OR2C1O95371 312 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
SKA2-209ENST00000583976 NPY1RP25929 384 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 ARL3P36405 182 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 NKX2-1P43699 371 aaPredicted RBP11.78□□□□□ -0.52
SKA2-209ENST00000583976 POLR2GP62487 172 aaKnown RBP eCLIP11.78□□□□□ -0.52
SKA2-209ENST00000583976 MLANAQ16655 118 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 Q56UQ5 140 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 CACNG8Q8WXS5 425 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 NEURL2Q9BR09 285 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 PAIP2BQ9ULR5 123 aaKnown RBP11.78□□□□□ -0.52
SKA2-209ENST00000583976 FRAS1Q86XX4 4008 aa11.78□□□□□ -0.52
SKA2-209ENST00000583976 OR2T8A6NH00 312 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 GOSR2O14653 212 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 GGCTO75223 188 aaKnown RBP11.77□□□□□ -0.53
SKA2-209ENST00000583976 OPRK1P41145 380 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 ID3Q02535 119 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 RGS21Q2M5E4 152 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 C2orf83Q53S99 150 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 GSG1LQ6UXU4 331 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 DYNLRB2Q8TF09 96 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 TMEM170AQ8WVE7 144 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 PEMTQ9UBM1 199 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 U3KQ87 197 aa11.77□□□□□ -0.53
SKA2-209ENST00000583976 IGHV3-35A0A0C4DH35 117 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 CORTO00230 105 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 SSNA1O43805 119 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 JTBO76095 146 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 SIX6O95475 246 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 MFAP4P55083 255 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 TATDN3Q17R31 274 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 FAM209BQ5JX69 171 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 PVRIGQ6DKI7 326 aa11.76□□□□□ -0.53
SKA2-209ENST00000583976 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms