RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	TRAV18	A0A075B6X5	111 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	IGHV3-66	A0A0C4DH42	116 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	TRDV1	A0A1B0GX56	115 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877		I3L2K1	104 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	KRAS	P01116	189 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	IGHV3-48	P01763	117 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	LPAR6	P43657	344 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	C12orf74	Q32Q52	190 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	TOMM20L	Q6UXN7	152 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877		Q6ZNX1	250 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	ZNF367	Q7RTV3	350 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	HOGA1	Q86XE5	327 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	ZNF575	Q86XF7	245 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	FAM24B	Q8N5W8	94 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	PINX1	Q96BK5	328 aa	Known RBP	6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	MOB3A	Q96BX8	217 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	TMEM14B	Q9NUH8	114 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	NDUFB11	Q9NX14	153 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	FKBP11	Q9NYL4	201 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	DAPK2	Q9UIK4	370 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	TBC1D24	Q9ULP9	559 aa		6.29	□□□□□ -1.4
NUP85-223	ENST00000583877	APOH	P02749	345 aa	Predicted RBP	6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	RLN1	P04808	185 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	C4BPB	P20851	252 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	F2R	P25116	425 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	GNRHR	P30968	328 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	G6PC	P35575	357 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	TBCE	Q15813	527 aa	Predicted RBP	6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	ZNF767P	Q75MW2	155 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	CLVS1	Q8IUQ0	354 aa	Predicted RBP	6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	UBE2DNL	Q8IWF7	75 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	ZNF114	Q8NC26	417 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	CSNK1G2-AS1	Q8NCQ2	148 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	STXBP6	Q8NFX7	210 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	S100Z	Q8WXG8	99 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	GRAMD2B	Q96HH9	432 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	TMEM231	Q9H6L2	316 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	PRND	Q9UKY0	176 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877	CELA1	Q9UNI1	258 aa		6.28	□□□□□ -1.4
NUP85-223	ENST00000583877		A0A1B0GVG6	124 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	MEIS3P1	A6NDR6	274 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	KNCN	A6PVL3	124 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877		K7EQG2	157 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	MT-CO2	P00403	227 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	IFNA10	P01566	189 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	IFNA21	P01568	189 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	IFNA17	P01571	189 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	CD74	P04233	296 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	NPY1R	P25929	384 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	SOHLH1	Q5JUK2	328 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	UBE2U	Q5VVX9	321 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877		Q6ZR54	194 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	OR5AP2	Q8NGF4	316 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	LGALS14	Q8TCE9	139 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	FCAMR	Q8WWV6	532 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	IFT46	Q9NQC8	304 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	RHBDL2	Q9NX52	303 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	CLEC5A	Q9NY25	188 aa		6.27	□□□□□ -1.41
NUP85-223	ENST00000583877	IGLV2-18	A0A075B6J9	118 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877		A0A1W2PS18	150 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	DBX1	A6NMT0	343 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877		H3BMQ9	156 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	PGLYRP1	O75594	196 aa	Predicted RBP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	CDK2AP2	O75956	126 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	NPBWR1	P48145	328 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	ERH	P84090	104 aa	Known RBP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	SRSF3	P84103	164 aa	Known RBP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	ZNF600	Q6ZNG1	722 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	CMTM1	Q8IZ96	169 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	OR4A16	Q8NH70	328 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	NARS2	Q96I59	477 aa	Known RBP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	FAM210B	Q96KR6	192 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	ZNF2	Q9BSG1	426 aa	Predicted RBP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	SCRT1	Q9BWW7	348 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	WDR12	Q9GZL7	423 aa	Known RBP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	DIABLO	Q9NR28	239 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	EHF	Q9NZC4	300 aa		6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	PAIP2B	Q9ULR5	123 aa	Known RBP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877	PUS1	Q9Y606	427 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
NUP85-223	ENST00000583877		A0A0A6YYH2	397 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877		A6NJ64	397 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	ZNF688	P0C7X2	276 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	NPPC	P23582	126 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	PSMB9	P28065	219 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	FGF9	P31371	208 aa	Predicted RBP	6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	CBX5	P45973	191 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	PRCD	Q00LT1	54 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	MXD1	Q05195	221 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	ZNF846	Q147U1	533 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	ACTL10	Q5JWF8	245 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	IDNK	Q5T6J7	187 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	SFXN4	Q6P4A7	337 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	DHRS11	Q6UWP2	260 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877		Q6ZRM9	215 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	H2BFWT	Q7Z2G1	175 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	DCANP1	Q8TF63	244 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	TMEM230	Q96A57	120 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	C1QTNF4	Q9BXJ3	329 aa		6.25	□□□□□ -1.41
NUP85-223	ENST00000583877	FAM212B	Q9NTI7	297 aa	Predicted RBP	6.25	□□□□□ -1.41

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