RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 CACFD1Q9UGQ2 172 aa7.5□□□□□ -1.21
CDK5RAP3-227ENST00000583352 IGHV7-81A0A0B4J1V7 117 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 CEBPZOSA8MTT3 80 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 LINC01619G3V211 115 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 H3BP45 60 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 METTL15P1P0C7V9 234 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 GP9P14770 177 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 MC5RP33032 325 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 TMEM267Q0VDI3 215 aaPredicted RBP7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 CLINT1Q14677 625 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ECSCRQ19T08 205 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 C5orf64Q2M2E5 130 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 SPANXN5Q5MJ07 72 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 EIF4E3Q8N5X7 224 aaKnown RBP7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 TMEM217Q8N7C4 229 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 OSR1Q8TAX0 266 aaPredicted RBP7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 DLX4Q92988 240 aaPredicted RBP7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 FAM210AQ96ND0 272 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 CITED4Q96RK1 184 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ATP5SQ99766 215 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 BET1LQ9NYM9 111 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 FOXA2Q9Y261 457 aaPredicted RBP7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
CDK5RAP3-227ENST00000583352 TEX50A0A1B0GTY4 177 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 A0A1W2PN81 502 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 C15orf61A6NNL5 157 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 C15orf62A8K5M9 175 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 DFFBO76075 338 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 KBTBD11O94819 623 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 IFNA17P01571 189 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 IGLV2-23P01705 113 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 APOA2P02652 100 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 CRYGBP07316 175 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 FGF2P09038 288 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 LGALS1P09382 135 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 CNTFRP26992 372 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ATP6V0CP27449 155 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 CHRNA7P36544 502 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 SLURP1P55000 103 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 OR2B8PP59922 312 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ZNF266Q14584 549 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ATP6V1FQ16864 119 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 BTNL8Q6UX41 500 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 HSD17B13Q7Z5P4 300 aaPredicted RBP7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 STX12Q86Y82 276 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 PDPNQ86YL7 162 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 NPBQ8NG41 125 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 FLYWCH2Q96CP2 140 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 RITA1Q96K30 269 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 PARD6GQ9BYG4 376 aaPredicted RBP7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 SH3BGRL3Q9H299 93 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 PFDN2Q9UHV9 154 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 PRNDQ9UKY0 176 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 STRAPQ9Y3F4 350 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 RFNGQ9Y644 331 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
CDK5RAP3-227ENST00000583352 SORL1Q92673 2214 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 SHOXO15266 292 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 RBMXL2O75526 392 aaKnown RBP7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 NDUFA3O95167 84 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 MYOD1P15172 320 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 LGALS7P47929 136 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 BLOC1S1P78537 153 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 MRGPRG-AS1Q2M3A8 158 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 SPINK9Q5DT21 86 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ACSM6Q6P461 480 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 HSD17B11Q8NBQ5 300 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 OR4A5Q8NH83 315 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 LYPD6BQ8NI32 183 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ABHD5Q8WTS1 349 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 TMEM170AQ8WVE7 144 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ARPC1AQ92747 370 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 MARC2Q969Z3 335 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 ZNF257Q9Y2Q1 563 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 WASHC3Q9Y3C0 194 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 OR51B2Q9Y5P1 312 aa7.47□□□□□ -1.21
CDK5RAP3-227ENST00000583352 IGHV4OR15-8A0A075B7B6 117 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 A0A087WW49 117 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 LCE6AA0A183 80 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 ZNF705EA8MWA4 302 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 H7C2Y5 167 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 SOX15O60248 233 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 IFNA5P01569 189 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 SAA1P0DJI8 122 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 RAB5CP51148 216 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 CRIP2P52943 208 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 RPS16P62249 146 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 HBG1P69891 147 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 HBG2P69892 147 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 NDPQ00604 133 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 PLGLAQ15195 96 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 VWC2Q2TAL6 325 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 C19orf54Q5BKX5 351 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 OR2G3Q8NGZ4 309 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 TMEM167AQ8TBQ9 72 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 FBXL15Q9H469 300 aa7.46□□□□□ -1.22
CDK5RAP3-227ENST00000583352 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms