RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 PMS2P5A8MQ11 134 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 ADARB2-AS1A8MUL3 147 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 H3BP45 60 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 JTBO76095 146 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 CTRB1P17538 263 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 GPX4P36969 197 aaPredicted RBP12.07□□□□□ -0.48
SS18-216ENST00000580751 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
SS18-216ENST00000580751 CTRB2Q6GPI1 263 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 SLC51BQ86UW2 128 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 OR4F17Q8NGA8 305 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
SS18-216ENST00000580751 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
SS18-216ENST00000580751 WNK1Q9H4A3 2382 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 A0A0G2JLM5 398 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 IFNA4P05014 189 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 METTL15P1P0C7V9 234 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 DEFA4P12838 97 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
SS18-216ENST00000580751 NHLH2Q02577 135 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 OPCMLQ14982 345 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 ETFRF1Q6IPR1 90 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 P2RX4Q99571 388 aa12.06□□□□□ -0.48
SS18-216ENST00000580751 PARD6GQ9BYG4 376 aaPredicted RBP12.06□□□□□ -0.48
SS18-216ENST00000580751 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 FAM223BA6NKX1 122 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 CST7O76096 145 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 REG1AP05451 166 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 DLK1P80370 383 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 KIAA0141Q14154 515 aaPredicted RBP12.05□□□□□ -0.48
SS18-216ENST00000580751 VWC2Q2TAL6 325 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 FAM223AQ8IWN6 122 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 UBAC2Q8NBM4 344 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 NECAP1Q8NC96 275 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 OR5C1Q8NGR4 320 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 C4orf3Q8WVX3 66 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 THYN1Q9P016 225 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 FBXL17Q9UF56 701 aa12.05□□□□□ -0.48
SS18-216ENST00000580751 MGAM2Q2M2H8 2515 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 PKD1L1Q8TDX9 2849 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 TRBV9A0A0B4J1U6 114 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 RPS10-NUDT3A0A1W2PQS6 291 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 PRH1P02810 166 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 RHOGP84095 191 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 SLC38A11Q08AI6 406 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 ATP5SQ99766 215 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 TMEM147Q9BVK8 224 aa12.04□□□□□ -0.48
SS18-216ENST00000580751 IGLV11-55A0A075B6I3 123 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 IFNA5P01569 189 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
SS18-216ENST00000580751 RUNX1Q01196 453 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
SS18-216ENST00000580751 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 LILRB2Q8N423 598 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 TMEM217Q8N7C4 229 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 PHYHIPLQ96FC7 376 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 GNB4Q9HAV0 340 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 UQCC1Q9NVA1 299 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 PAIP2BQ9ULR5 123 aaKnown RBP12.03□□□□□ -0.48
SS18-216ENST00000580751 TRRAPQ9Y4A5 3859 aa12.03□□□□□ -0.48
SS18-216ENST00000580751 MPDU1O75352 247 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 OR2J3O76001 311 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 TSPAN15O95858 294 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 TPT1P13693 172 aaKnown RBP12.02□□□□□ -0.49
SS18-216ENST00000580751 CD69Q07108 199 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 ARL16Q0P5N6 197 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 PRR31Q5SQ13 230 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 OR8G2PQ6IF36 304 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 C19orf35Q6ZS72 473 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 C18orf65Q6ZTR6 163 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 FANCD2OSQ96PS1 177 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 ZNF471Q9BX82 626 aaPredicted RBP12.02□□□□□ -0.49
SS18-216ENST00000580751 ARV1Q9H2C2 271 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 NPVFQ9HCQ7 196 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
SS18-216ENST00000580751 I3L521 148 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 PF4P02776 101 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 DEFA5Q01523 94 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 ATP5G2Q06055 141 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 BAP18Q8IXM2 172 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 OR5B12Q96R08 314 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 ATP6V0BQ99437 205 aa12.01□□□□□ -0.49
SS18-216ENST00000580751 MYCNOSP40205 109 aa12□□□□□ -0.49
SS18-216ENST00000580751 CLINT1Q14677 625 aa12□□□□□ -0.49
SS18-216ENST00000580751 SLC25A24Q6NUK1 477 aa12□□□□□ -0.49
SS18-216ENST00000580751 SCGB1C1Q8TD33 95 aa12□□□□□ -0.49
SS18-216ENST00000580751 GNPNAT1Q96EK6 184 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms