RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 NAA50Q9GZZ1 169 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 MIXL1Q9H2W2 232 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 TEX13DA0A0J9YY54 714 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 RPS10-NUDT3A0A1W2PQS6 291 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 MPTX1A8MV57 137 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 PI3P19957 117 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 CRYBB3P26998 211 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 TMBIM6P55061 237 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 ATP5IP56385 69 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 TRIM16LQ309B1 348 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 DEFB135Q30KP9 77 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 GPR141Q7Z602 305 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 NOXA1Q86UR1 476 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 OR4D10Q8NGI6 311 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 RNASEH2CQ8TDP1 164 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 PINX1Q96BK5 328 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 PRRT1Q99946 306 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 RTBDNQ9BSG5 229 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 C11orf68Q9H3H3 251 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 ENY2Q9NPA8 101 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 CCDC59Q9P031 241 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 UBQLN2Q9UHD9 624 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 GPR132Q9UNW8 380 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 C14orf166Q9Y224 244 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 PUS1Q9Y606 427 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 SELENOKQ9Y6D0 94 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 TMEM56-RWDD3S4R434 201 aa10.68□□□□□ -0.7
SMARCE1-216ENST00000580419 A0A0J9YWU9 116 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 DISC1C4P0D8 188 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 ZNF207O43670 478 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 GSTZ1O43708 216 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 AKAIN1P0CW23 69 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 SLC25A4P12235 298 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 NPPCP23582 126 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 C2orf83Q53S99 150 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 CEMP1Q6PRD7 247 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 TCF24Q7RTU0 167 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 MARCH1Q8TCQ1 289 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 LINC00476Q8WZB0 136 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 SCGB3A2Q96PL1 93 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 NAA60Q9H7X0 242 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 SEPSECSQ9HD40 501 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 KLK5Q9Y337 293 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 KMT2AQ03164 3969 aa10.67□□□□□ -0.7
SMARCE1-216ENST00000580419 IGHV3OR16-8A0A075B7F1 116 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 CRYM-AS1A6NIL9 109 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 ETV6P41212 452 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 HOXA1P49639 335 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 PPP5CP53041 499 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 YPEL3P61236 119 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 IZUMO4Q1ZYL8 232 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 SCGB2B2Q4G0G5 96 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 DEDD2Q8WXF8 326 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 ST8SIA2Q92186 375 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 METTL26Q96S19 204 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 MFFQ9GZY8 342 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 FNDC4Q9H6D8 234 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 RSL24D1Q9UHA3 163 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-216ENST00000580419 A0A1B0GU03 582 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 CTDSP2O14595 271 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 RGS5O15539 181 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 IGKV1-17P01599 117 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 OR5AC1P0C628 307 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 OPRK1P41145 380 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 EIF2B2P49770 351 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 TCTAP57738 103 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 SP6Q3SY56 376 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 NMSQ5H8A3 153 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 ETFRF1Q6IPR1 90 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 Q6ZRM9 215 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 DYNC2LI1Q8TCX1 351 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 SOSTQ9BQB4 213 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 KCNIP3Q9Y2W7 256 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 U3KQE9 123 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 AGRNO00468 2067 aa10.65□□□□□ -0.7
SMARCE1-216ENST00000580419 A0A0G2JRQ6 117 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 ANKRD20A5PA0PJZ0 165 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 CXorf65A6NEN9 183 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 AP2S1P53680 142 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 APRG1Q8IVJ8 170 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 SELENOHQ8IZQ5 122 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 OR4C16Q8NGL9 310 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 OR1S2Q8NGQ3 325 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 RNASE11Q8TAA1 199 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 DIRAS2Q96HU8 199 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
SMARCE1-216ENST00000580419 HELTA6NFD8 242 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 K7EQG2 157 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 DNASE2O00115 360 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 IGHV3-48P01763 117 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 IGLC1P0CG04 106 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 SRPXP78539 464 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 SPCS2Q15005 226 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 LHFPL5Q8TAF8 219 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms