RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 HLA-AP01891 365 aaKnown RBP10.01□□□□□ -0.81
TRAF4-214ENST00000580073 H2AFB2P0C5Z0 115 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 BMI1P35226 326 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 MZT2BQ6NZ67 158 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 BTNL8Q6UX41 500 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 HSD17B13Q7Z5P4 300 aaPredicted RBP10.01□□□□□ -0.81
TRAF4-214ENST00000580073 UXS1Q8NBZ7 420 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 DUSP18Q8NEJ0 188 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 OR5B3Q8NH48 314 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 CACNG8Q8WXS5 425 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 RRNAD1Q96FB5 475 aaKnown RBP10.01□□□□□ -0.81
TRAF4-214ENST00000580073 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
TRAF4-214ENST00000580073 MRPL27Q9P0M9 148 aaKnown RBP10.01□□□□□ -0.81
TRAF4-214ENST00000580073 KLK5Q9Y337 293 aaPredicted RBP10.01□□□□□ -0.81
TRAF4-214ENST00000580073 SCAF4O95104 1147 aaKnown RBP10□□□□□ -0.81
TRAF4-214ENST00000580073 NXPH3O95157 252 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 LY6G6CO95867 125 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 OR13C7P0DN81 318 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 ATF4P18848 351 aaPredicted RBP10□□□□□ -0.81
TRAF4-214ENST00000580073 PRCDQ00LT1 54 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 LAMTOR1Q6IAA8 161 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 Q6ZWC4 215 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 WFDC3Q8IUB2 231 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 FAM219AQ8IW50 185 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 OR2C3Q8N628 320 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 OVOL2Q9BRP0 275 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 MLXQ9UH92 298 aa10□□□□□ -0.81
TRAF4-214ENST00000580073 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 PITX3O75364 302 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 ATG12O94817 140 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 IGHV3-23P01764 117 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 HOXB5P09067 269 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 ANXA3P12429 323 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 TNFRSF9Q07011 255 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 PMS2P11Q13670 270 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 C4orf46Q504U0 113 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 TM4SF20Q53R12 229 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 GGNBP1Q5YKI7 109 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 PLET1Q6UQ28 207 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 RNASE11Q8TAA1 199 aaKnown RBP9.99□□□□□ -0.81
TRAF4-214ENST00000580073 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-214ENST00000580073 S4R3C0 116 aa9.99□□□□□ -0.81
TRAF4-214ENST00000580073 KIR2DL5BA0A0G2JN68 375 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 KIR2DL5BA0A0G2JPC4 375 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 EDN2P20800 178 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 GPR183P32249 361 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 SRPXP78539 464 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 KIR2DL5AQ8N109 375 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 KIR2DL5BQ8NHK3 375 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 ENKURQ8TC29 256 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 MITD1Q8WV92 249 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 ATP6V0BQ99437 205 aa9.98□□□□□ -0.81
TRAF4-214ENST00000580073 DAZ1Q9NQZ3 744 aaKnown RBP9.98□□□□□ -0.81
TRAF4-214ENST00000580073 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
TRAF4-214ENST00000580073 A0A1B0GU03 582 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 DUXBA0A1W2PPF3 345 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 OR4C46A6NHA9 309 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 INS-IGF2F8WCM5 200 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 TSPAN4O14817 238 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 SPRY2O43597 315 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 IFNA17P01571 189 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 CLEC3BP05452 202 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 C8orf88P0DMB2 117 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 SULT1A3P0DMM9 295 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 SULT1A4P0DMN0 295 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 SMCO1Q147U7 214 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 SPSB3Q6PJ21 355 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 STPG3Q8N7X2 389 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 OR52E5Q8NH55 327 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 ZNF502Q8TBZ5 544 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 ZNF431Q8TF32 576 aaPredicted RBP9.97□□□□□ -0.81
TRAF4-214ENST00000580073 TMEM170AQ8WVE7 144 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 TMEM190Q8WZ59 177 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 BSCL2Q96G97 398 aaPredicted RBP9.97□□□□□ -0.81
TRAF4-214ENST00000580073 MARVELD1Q9BSK0 173 aa9.97□□□□□ -0.81
TRAF4-214ENST00000580073 ZNF436Q9C0F3 470 aaPredicted RBP9.97□□□□□ -0.81
TRAF4-214ENST00000580073 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
TRAF4-214ENST00000580073 IGHV3-21A0A0B4J1V1 117 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 A0A0J9YWU9 116 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 MFSD2BA6NFX1 497 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 TGOLN2O43493 480 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 IL5P05113 134 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 RNASE2P10153 161 aaKnown RBP9.96□□□□□ -0.82
TRAF4-214ENST00000580073 SPCS3P61009 180 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 PVRIGQ6DKI7 326 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 OR10C1Q96KK4 312 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 RBKSQ9H477 322 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 HSPB7Q9UBY9 170 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 TMED3Q9Y3Q3 217 aa9.96□□□□□ -0.82
TRAF4-214ENST00000580073 F8W735 103 aaPredicted RBP9.95□□□□□ -0.82
TRAF4-214ENST00000580073 INMT-MINDY4F8WBC2 141 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 K7EIM0 57 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 CCSO14618 274 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 DEFA1P59665 94 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 DEFA3P59666 94 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 MLANAQ16655 118 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 DEFB135Q30KP9 77 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 BSXQ3C1V8 233 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms