RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 COX14Q96I36 57 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 V9GYY9 64 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 TMEM238C9JI98 176 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 SRSF1Q07955 248 aaKnown RBP eCLIP4.34□□□□□ -1.71
NF1-219ENST00000579081 ZNF562Q6V9R5 426 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 Q71RC1 249 aaPredicted RBP4.34□□□□□ -1.71
NF1-219ENST00000579081 ATP6V0BQ99437 205 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 DPM3Q9P2X0 92 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 GRIFINA4D1Z8 144 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 UMODP07911 640 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 DRD3P35462 400 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 RTN4RL2Q86UN3 420 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 RNF182Q8N6D2 247 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 IGHV1-45A0A0A0MS14 117 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 IGHV1-24A0A0C4DH33 117 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 TCRBV4S1A1TA0A5B7 111 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 HBDP02042 147 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 SPCS1Q9Y6A9 102 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 S4R3C0 116 aa4.34□□□□□ -1.71
NF1-219ENST00000579081 COL16A1Q07092 1604 aaPredicted RBP4.34□□□□□ -1.72
NF1-219ENST00000579081 TRBV5-5A0A0J9YX44 114 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 TMEM213A2RRL7 107 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 VWC2LB2RUY7 222 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 IGHV3-11P01762 117 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 IGHG4P01861 327 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 PSG1P11464 419 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 KIAA0040Q15053 153 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 LILRA6Q6PI73 481 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 C21orf62Q9NYP8 219 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 FOXA2Q9Y261 457 aaPredicted RBP4.34□□□□□ -1.72
NF1-219ENST00000579081 DIDO1Q9BTC0 2240 aaKnown RBP4.34□□□□□ -1.72
NF1-219ENST00000579081 SPTAN1Q13813 2472 aaKnown RBP4.34□□□□□ -1.72
NF1-219ENST00000579081 ITGBL1O95965 494 aaPredicted RBP4.34□□□□□ -1.72
NF1-219ENST00000579081 IGHMP01871 453 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 CEACAM8P31997 349 aaPredicted RBP4.34□□□□□ -1.72
NF1-219ENST00000579081 ERVK11-1P61568 191 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 GAGE2BQ13066 116 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 GAGE2EQ4V326 116 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 FBXL15Q9H469 300 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 GAGE2DQ9UEU5 116 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 ANAPC10Q9UM13 185 aa4.34□□□□□ -1.72
NF1-219ENST00000579081 A0A087WX48 190 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 F2Z2F3 143 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 EFEMP2O95967 443 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 IGHV3-48P01763 117 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 CKS1BP61024 79 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 TNFRSF9Q07011 255 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 Q0VG73 95 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 ZNF721Q8TF20 911 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 PRADC1Q9BSG0 188 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 SIGLEC8Q9NYZ4 499 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 HRKO00198 91 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 DLEU1O43261 78 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 IGKV1D-33P01593 117 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 IGKV1-33P01594 117 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 CD7P09564 240 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 KLK2P20151 261 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 FOXA3P55318 350 aaPredicted RBP4.33□□□□□ -1.72
NF1-219ENST00000579081 TGIF1Q15583 401 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 FER1L6-AS1Q8NA97 138 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 OR11H7Q8NGC8 314 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 FNDC1Q4ZHG4 1894 aaPredicted RBP4.33□□□□□ -1.72
NF1-219ENST00000579081 PLXNB2O15031 1838 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 SIP14410 1827 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 TRGV11A0A075B6L2 103 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 TRAV2A0A0B4J234 112 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 MUC21A0A0G2JKD1 596 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 MUC21A0A140T8X8 626 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 CD28P10747 220 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 P2RY4P51582 365 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 ATXN8Q156A1 80 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 MUC21Q5SSG8 566 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 COLCA1Q6ZS62 124 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 LHFPL4Q7Z7J7 247 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 GATD1Q8NB37 220 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 KLF14Q8TD94 323 aaPredicted RBP4.33□□□□□ -1.72
NF1-219ENST00000579081 MARCH11A6NNE9 402 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 INS-IGF2F8WCM5 200 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 H3BMM0 161 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 SNAI2O43623 268 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 INSP01308 110 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 CXCL3P19876 107 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 CENPWQ5EE01 88 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 MUC7Q8TAX7 377 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 RSPO3Q9BXY4 272 aaPredicted RBP4.33□□□□□ -1.72
NF1-219ENST00000579081 DOCK10Q96BY6 2186 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 SPINT1O43278 529 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 F12P00748 615 aaPredicted RBP4.33□□□□□ -1.72
NF1-219ENST00000579081 NBEAP1P0C6P0 100 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 EVI2AP22794 236 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 HIST1H4AP62805 103 aaKnown RBP4.33□□□□□ -1.72
NF1-219ENST00000579081 MSRB3Q8IXL7 192 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 SCARF2Q96GP6 870 aaPredicted RBP4.33□□□□□ -1.72
NF1-219ENST00000579081 TICRRQ7Z2Z1 1910 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 A0A1W2PRE2 83 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 EFNB1P98172 346 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 ZAR1Q86SH2 424 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 OR11H6Q8NGC7 330 aa4.33□□□□□ -1.72
NF1-219ENST00000579081 A0A1W2PPC1 479 aa4.32□□□□□ -1.72
NF1-219ENST00000579081 J3KT08 172 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms