RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 UBAC2Q8NBM4 344 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 OR13C8Q8NGS7 320 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 OR5H2Q8NGV7 314 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 OR6F1Q8NGZ6 308 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 OR11H2Q8NH07 326 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 GLYATL2Q8WU03 294 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 GLMPQ8WWB7 406 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 MISP3Q96FF7 219 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 S100A16Q96FQ6 103 aaKnown RBP3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 SOSTQ9BQB4 213 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 CSTL1Q9H114 145 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 VCX3BQ9H321 246 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 COMMD3Q9UBI1 195 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 MTFP1Q9UDX5 166 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 PRNDQ9UKY0 176 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 PUS1Q9Y606 427 aaKnown RBP eCLIP3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 NACAE9PAV3 2078 aa3.2□□□□□ -1.9
PPP4R1-209ENST00000578329 HSPG2P98160 4391 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 TRAV14DV4A0A0A6YYC5 116 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 OR4C46A6NHA9 309 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 MPTX1A8MV57 137 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 SOCS3O14543 225 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 CTDSP2O14595 271 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 TMEM127O75204 238 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 GABARAPO95166 117 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 CDS2O95674 445 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 RCVRNP35243 200 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 RANBP1P43487 201 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 ALDH3B2P48448 385 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 APOC4P55056 127 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 MFAP4P55083 255 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 PIGPP57054 158 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 TAS2R46P59540 309 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 SUPT4H1P63272 117 aaKnown RBP3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 MEF2DQ14814 521 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 SPCS2Q15005 226 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 C12orf74Q32Q52 190 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 ANKRD55Q3KP44 614 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 GDF5OSQ5U4N7 250 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 PRSS54Q6PEW0 395 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 Q6ZTC4 211 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 ZNF767PQ75MW2 155 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 SELENOHQ8IZQ5 122 aaKnown RBP3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 TSPAN14Q8NG11 270 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 MARCH1Q8TCQ1 289 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 GPR146Q96CH1 333 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 TXN2Q99757 166 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 RARRES2Q99969 163 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 SCPEP1Q9HB40 452 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 IFT46Q9NQC8 304 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 CLEC5AQ9NY25 188 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 MUC4Q99102 2169 aa3.19□□□□□ -1.9
PPP4R1-209ENST00000578329 IGKV1OR2-108A0A075B7D4 117 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 TRAV2A0A0B4J234 112 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 C3orf85A0A1B0GTC6 90 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 PRSS46E5RG02 174 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 CLN5O75503 358 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 SNAPC5O75971 98 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 CA1P00915 261 aaPredicted RBP3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 PRM2P04554 102 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 OR5AC1P0C628 307 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 ZNF688P0C7X2 276 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 HLA-DMBP28068 263 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 RPL5P46777 297 aaKnown RBP3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 P2RY1P47900 373 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 NMSQ5H8A3 153 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 C16orf54Q6UWD8 224 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 ZNF600Q6ZNG1 722 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 TMEM182Q6ZP80 229 aaPredicted RBP3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 Q6ZR54 194 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 H2BFWTQ7Z2G1 175 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 SLC38A6Q8IZM9 456 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 ZNF709Q8N972 641 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 OR4X1Q8NH49 305 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 GATAD1Q8WUU5 269 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 PINX1Q96BK5 328 aaKnown RBP3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 C20orf173Q96LM9 149 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 TMEM56Q96MV1 263 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 CMTM3Q96MX0 182 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 RAB40CQ96S21 281 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 AIFM2Q9BRQ8 373 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 WDR12Q9GZL7 423 aaKnown RBP3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 TMEM222Q9H0R3 208 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 HRH4Q9H3N8 390 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 THYN1Q9P016 225 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 GPR132Q9UNW8 380 aa3.18□□□□□ -1.9
PPP4R1-209ENST00000578329 LRP1BQ9NZR2 4599 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 A0A087WXM4 84 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 CRYM-AS1A6NIL9 109 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 A8MTW9 85 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 ZNF705FA8MVS1 300 aaPredicted RBP3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 FAM90A26D6RGX4 464 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 H3BMM0 161 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 BUB3O43684 328 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 GNG7O60262 68 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 PITX3O75364 302 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 YIF1AO95070 293 aa3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 ZNF705DP0CH99 300 aaPredicted RBP3.17□□□□□ -1.9
PPP4R1-209ENST00000578329 ZNF705BP0CI00 300 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms