RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 TMEM128Q5BJH2 165 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 TRIQKQ629K1 86 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 ETFRF1Q6IPR1 90 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 TMEM116Q8NCL8 245 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 LHFPL5Q8TAF8 219 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 TRIM63Q969Q1 353 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 GPR146Q96CH1 333 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 TMEM231Q9H6L2 316 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 STAB2Q8WWQ8 2551 aa10.4□□□□□ -0.74
NDE1-211ENST00000576502 TRAV30A0A087WSZ9 112 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 TRAV14DV4A0A0A6YYC5 116 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 A0A0G2JRQ6 117 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 CMC4P56277 68 aaPredicted RBP10.39□□□□□ -0.75
NDE1-211ENST00000576502 PVRIGQ6DKI7 326 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 TMED4Q7Z7H5 227 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 SLC24A4Q8NFF2 622 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 RNASEH2CQ8TDP1 164 aaKnown RBP10.39□□□□□ -0.75
NDE1-211ENST00000576502 TMEM230Q96A57 120 aa10.39□□□□□ -0.75
NDE1-211ENST00000576502 NARS2Q96I59 477 aaKnown RBP10.39□□□□□ -0.75
NDE1-211ENST00000576502 IGHV7-4-1A0A0J9YVY3 117 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 NAP1L6A6NFF2 107 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 SLC25A4P12235 298 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 SMCO1Q147U7 214 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 C2orf83Q53S99 150 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 Q6ZRM9 215 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 OR4X1Q8NH49 305 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 OR10C1Q96KK4 312 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 CITED4Q96RK1 184 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 TENM3Q9P273 2699 aa10.38□□□□□ -0.75
NDE1-211ENST00000576502 IGHV3OR16-8A0A075B7F1 116 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 A0A1W2PS18 150 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 CENPXA8MT69 81 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 ZNF207O43670 478 aaKnown RBP10.37□□□□□ -0.75
NDE1-211ENST00000576502 CLN5O75503 358 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 IGHV3-48P01763 117 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 VAMP1P23763 118 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 ATP5IP56385 69 aaPredicted RBP10.37□□□□□ -0.75
NDE1-211ENST00000576502 UBE2MP61081 183 aaKnown RBP10.37□□□□□ -0.75
NDE1-211ENST00000576502 RBMS2Q15434 407 aaKnown RBP10.37□□□□□ -0.75
NDE1-211ENST00000576502 CNPY1Q3B7I2 92 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 BSXQ3C1V8 233 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 RHPN1-AS1Q9BWJ2 59 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 U3KQ87 197 aa10.37□□□□□ -0.75
NDE1-211ENST00000576502 LOC102724200A0A096LPH7 203 aaPredicted RBP10.36□□□□□ -0.75
NDE1-211ENST00000576502 A0A1B0GU03 582 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 CHEK1O14757 476 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 TMEM50AO95807 157 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 IFNA10P01566 189 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 NPY1RP25929 384 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 TNFRSF9Q07011 255 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 LINC00322Q6ZN03 302 aaPredicted RBP10.36□□□□□ -0.75
NDE1-211ENST00000576502 CENPSQ8N2Z9 138 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 OR1S2Q8NGQ3 325 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 METTL26Q96S19 204 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 SRRQ9GZT4 340 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 PUS1Q9Y606 427 aaKnown RBP eCLIP10.36□□□□□ -0.75
NDE1-211ENST00000576502 SELENOKQ9Y6D0 94 aa10.36□□□□□ -0.75
NDE1-211ENST00000576502 MED6O75586 246 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 SLC25A6P12236 298 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 NPPCP23582 126 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 APOC4P55056 127 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 SUPT4H1P63272 117 aaKnown RBP10.35□□□□□ -0.75
NDE1-211ENST00000576502 NMSQ5H8A3 153 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 LYZL2Q7Z4W2 148 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 DTD1Q8TEA8 209 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 GRAMD2BQ96HH9 432 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 SDHCQ99643 169 aaPredicted RBP10.35□□□□□ -0.75
NDE1-211ENST00000576502 C7orf50Q9BRJ6 194 aaKnown RBP10.35□□□□□ -0.75
NDE1-211ENST00000576502 WFDC10AQ9H1F0 79 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 HSPB7Q9UBY9 170 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
NDE1-211ENST00000576502 RBMY1BA6NDE4 496 aaKnown RBP10.34□□□□□ -0.75
NDE1-211ENST00000576502 RBMY1EA6NEQ0 496 aaKnown RBP10.34□□□□□ -0.75
NDE1-211ENST00000576502 RBMY1DP0C7P1 496 aaKnown RBP10.34□□□□□ -0.75
NDE1-211ENST00000576502 LYL1P12980 280 aa10.34□□□□□ -0.75
NDE1-211ENST00000576502 EIF2B2P49770 351 aaKnown RBP10.34□□□□□ -0.75
NDE1-211ENST00000576502 RPP30P78346 268 aaKnown RBP10.34□□□□□ -0.75
NDE1-211ENST00000576502 LRTM2Q8N967 370 aa10.34□□□□□ -0.75
NDE1-211ENST00000576502 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
NDE1-211ENST00000576502 RNF2Q99496 336 aa10.34□□□□□ -0.75
NDE1-211ENST00000576502 FNDC4Q9H6D8 234 aaPredicted RBP10.34□□□□□ -0.75
NDE1-211ENST00000576502 FAM90A26D6RGX4 464 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 DNASE2O00115 360 aaPredicted RBP10.33□□□□□ -0.76
NDE1-211ENST00000576502 NXPH3O95157 252 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 SFT2D2O95562 160 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 IFNA4P05014 189 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 RND2P52198 227 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 RAB11AP62491 216 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 BAK1Q16611 211 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 TCF24Q7RTU0 167 aa10.33□□□□□ -0.76
NDE1-211ENST00000576502 Q8WTZ3 238 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms