RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CLEC5AQ9NY25 188 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 HSF4Q9ULV5 492 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 ALG5Q9Y673 324 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 A0A1B0GV90 55 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 C15orf61A6NNL5 157 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 RAB27BO00194 218 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 EIF4EP06730 217 aaKnown RBP4.28□□□□□ -1.72
SMG6-219ENST00000575663 RBMY1A1P0DJD3 496 aaKnown RBP4.28□□□□□ -1.72
SMG6-219ENST00000575663 INAFM2P0DMQ5 153 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 HIST1H1BP16401 226 aaKnown RBP4.28□□□□□ -1.72
SMG6-219ENST00000575663 PRSS3P35030 304 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 FAUP35544 74 aaKnown RBP4.28□□□□□ -1.72
SMG6-219ENST00000575663 CEACAM6P40199 344 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 INPP1P49441 399 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 UBE2KP61086 200 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 RPS27AP62979 156 aaKnown RBP4.28□□□□□ -1.72
SMG6-219ENST00000575663 HLA-DRB3P79483 266 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 TMEM41BQ5BJD5 291 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 MMD2Q8IY49 270 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 SELENOHQ8IZQ5 122 aaKnown RBP4.28□□□□□ -1.72
SMG6-219ENST00000575663 DUSP18Q8NEJ0 188 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 OR2D3Q8NGH3 330 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 OR10J5Q8NHC4 309 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 STOML3Q8TAV4 291 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 ST8SIA2Q92186 375 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 SLC25A38Q96DW6 304 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 ABHD1Q96SE0 405 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 SDHCQ99643 169 aaPredicted RBP4.28□□□□□ -1.72
SMG6-219ENST00000575663 TMEM59Q9BXS4 323 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 OR1A1Q9P1Q5 309 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 MTFP1Q9UDX5 166 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 NAGKQ9UJ70 344 aa4.28□□□□□ -1.72
SMG6-219ENST00000575663 TMEM272A0A1B0GTI8 110 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 J3QRK9 145 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 PROP1O75360 226 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 SCGB2A1O75556 95 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 CD74P04233 296 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 CTXN2P0C2S0 81 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 DEFA4P12838 97 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 NPY1RP25929 384 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 PSMB6P28072 239 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 GPR183P32249 361 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 GPX4P36969 197 aaPredicted RBP4.27□□□□□ -1.73
SMG6-219ENST00000575663 LINC00205P59089 165 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 TAS2R20P59543 309 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 TNP2Q05952 138 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 PLET1Q6UQ28 207 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 TOMM5Q8N4H5 51 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 OR10R2Q8NGX6 335 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 OSR1Q8TAX0 266 aaPredicted RBP4.27□□□□□ -1.73
SMG6-219ENST00000575663 GPX8Q8TED1 209 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 TMEM190Q8WZ59 177 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 C18orf15Q96N68 181 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 C2orf88Q9BSF0 95 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 ZNF436Q9C0F3 470 aaPredicted RBP4.27□□□□□ -1.73
SMG6-219ENST00000575663 LPAR5Q9H1C0 372 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 ATG5Q9H1Y0 275 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 OR2D2Q9H210 308 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 AUNIPQ9H7T9 357 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 ZNF430Q9H8G1 570 aaPredicted RBP4.27□□□□□ -1.73
SMG6-219ENST00000575663 RDH8Q9NYR8 311 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 STRAPQ9Y3F4 350 aaKnown RBP4.27□□□□□ -1.73
SMG6-219ENST00000575663 S4R3C0 116 aa4.27□□□□□ -1.73
SMG6-219ENST00000575663 MYCBP2O75592 4640 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 VPS13BQ7Z7G8 4022 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 TRAV18A0A075B6X5 111 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 IGHV3-35A0A0C4DH35 117 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 ANKRD20A5PA0PJZ0 165 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 SMIM30A4D0T7 59 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 SRRM4A7MD48 611 aaKnown RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 FOXI3A8MTJ6 420 aaPredicted RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 CYB5BO43169 146 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 LYRM1O43325 122 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 NAPSAO96009 420 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 CTSDP07339 412 aaPredicted RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 SAA1P0DJI8 122 aaPredicted RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 NQO2P16083 231 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 CLDN12P56749 244 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 TAS2R19P59542 299 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 UBE2G2P60604 165 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 IFITM3Q01628 133 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 GAGE1Q13065 139 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 UNC119Q13432 240 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 GAMTQ14353 236 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 MEF2DQ14814 521 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 BAK1Q16611 211 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 RNF212Q495C1 297 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 CDNFQ49AH0 187 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 C10orf55Q5SWW7 151 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 ZNF880Q6PDB4 577 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 Q6ZS49 121 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 C6orf201Q7Z4U5 140 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 TMEM229BQ8NBD8 167 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 VSTM2AQ8TAG5 236 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 ORAI1Q96D31 301 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms