RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 MRPL27Q9P0M9 148 aaKnown RBP10.29□□□□□ -0.76
CIITA-210ENST00000575513 HSPB7Q9UBY9 170 aa10.29□□□□□ -0.76
CIITA-210ENST00000575513 IGHV3-21A0A0B4J1V1 117 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 K7EMT4 169 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
CIITA-210ENST00000575513 IFNA21P01568 189 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 HOXB5P09067 269 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
CIITA-210ENST00000575513 NPBWR1P48145 328 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 TNFRSF9Q07011 255 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 C2orf83Q53S99 150 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 UNQ9165/PRO28630Q6UXU0 137 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 OR52B4Q8NGK2 314 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 OR1S1Q8NH92 325 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 TMEM190Q8WZ59 177 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 MARVELD1Q9BSK0 173 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 CHRDL1Q9BU40 450 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
CIITA-210ENST00000575513 ZC4H2Q9NQZ6 224 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 U3KQ87 197 aa10.28□□□□□ -0.76
CIITA-210ENST00000575513 C15orf62A8K5M9 175 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 CEBPZOSA8MTT3 80 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 A8MZ25 164 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 INMT-MINDY4F8WBC2 141 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 PRAF2O60831 178 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 CD69Q07108 199 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.77
CIITA-210ENST00000575513 TM4SF20Q53R12 229 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 HAPLN4Q86UW8 402 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 Q8N1Y9 231 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 UBAC2Q8NBM4 344 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 UXS1Q8NBZ7 420 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 RNASEH2CQ8TDP1 164 aaKnown RBP10.27□□□□□ -0.77
CIITA-210ENST00000575513 DYNLRB2Q8TF09 96 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 PINX1Q96BK5 328 aaKnown RBP10.27□□□□□ -0.77
CIITA-210ENST00000575513 SEC22CQ9BRL7 303 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.77
CIITA-210ENST00000575513 DNAH9Q9NYC9 4486 aa10.27□□□□□ -0.77
CIITA-210ENST00000575513 TRAV25A0A0B4J276 109 aa10.26□□□□□ -0.77
CIITA-210ENST00000575513 RPS10-NUDT3A0A1W2PQS6 291 aa10.26□□□□□ -0.77
CIITA-210ENST00000575513 GNG7O60262 68 aa10.26□□□□□ -0.77
CIITA-210ENST00000575513 ADAP1O75689 374 aa10.26□□□□□ -0.77
CIITA-210ENST00000575513 GTSCR1Q86UQ5 136 aa10.26□□□□□ -0.77
CIITA-210ENST00000575513 C12orf45Q8N5I9 185 aaPredicted RBP10.26□□□□□ -0.77
CIITA-210ENST00000575513 SLC24A4Q8NFF2 622 aa10.26□□□□□ -0.77
CIITA-210ENST00000575513 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
CIITA-210ENST00000575513 GPN1Q9HCN4 374 aaPredicted RBP10.26□□□□□ -0.77
CIITA-210ENST00000575513 IGHV3-35A0A0C4DH35 117 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 SNRPGP15A8MWD9 76 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 MED6O75586 246 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 TMEM50AO95807 157 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 PTTG1O95997 202 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 OPRK1P41145 380 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 ETFRF1Q6IPR1 90 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 DTD1Q8TEA8 209 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 OR10C1Q96KK4 312 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 RBKSQ9H477 322 aa10.25□□□□□ -0.77
CIITA-210ENST00000575513 FNDC4Q9H6D8 234 aaPredicted RBP10.25□□□□□ -0.77
CIITA-210ENST00000575513 TRAV30A0A087WSZ9 112 aa10.24□□□□□ -0.77
CIITA-210ENST00000575513 IZUMO1RA6ND01 250 aa10.24□□□□□ -0.77
CIITA-210ENST00000575513 CLN5O75503 358 aa10.24□□□□□ -0.77
CIITA-210ENST00000575513 SLC25A4P12235 298 aa10.24□□□□□ -0.77
CIITA-210ENST00000575513 ZNF414Q96IQ9 312 aa10.24□□□□□ -0.77
CIITA-210ENST00000575513 MLXQ9UH92 298 aa10.24□□□□□ -0.77
CIITA-210ENST00000575513 MPTX1A8MV57 137 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 NXPH3O95157 252 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 IGHV3-48P01763 117 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 EDN2P20800 178 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 NPY1RP25929 384 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 ID3Q02535 119 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 ZNF600Q6ZNG1 722 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 TMEM116Q8NCL8 245 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 OR4D5Q8NGN0 318 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 TMEM170AQ8WVE7 144 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 CACNG8Q8WXS5 425 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 CIB3Q96Q77 187 aaPredicted RBP10.23□□□□□ -0.77
CIITA-210ENST00000575513 C19orf73Q9NVV2 129 aa10.23□□□□□ -0.77
CIITA-210ENST00000575513 TRAV14DV4A0A0A6YYC5 116 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 SYNGR2O43760 224 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 IFNA10P01566 189 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 CD5P06127 495 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 IGHV4-30-4P0DP06 118 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 NKX2-1P43699 371 aaPredicted RBP10.22□□□□□ -0.77
CIITA-210ENST00000575513 MLANAQ16655 118 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 IAH1Q2TAA2 248 aaPredicted RBP10.22□□□□□ -0.77
CIITA-210ENST00000575513 LAMTOR1Q6IAA8 161 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 RBPMS2Q6ZRY4 209 aaKnown RBP10.22□□□□□ -0.77
CIITA-210ENST00000575513 TMEM61Q8N0U2 210 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 ZBTB8BQ8NAP8 495 aaPredicted RBP10.22□□□□□ -0.77
CIITA-210ENST00000575513 GINS3Q9BRX5 216 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 C20orf24Q9BUV8 137 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 SMPXQ9UHP9 88 aa10.22□□□□□ -0.77
CIITA-210ENST00000575513 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 TSPAN4O14817 238 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 YIF1AO95070 293 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 FRMD6-AS1P0C7T7 363 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 GPX4P36969 197 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms