RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 KLF9Q13886 244 aaPredicted RBP14.65□□□□□ -0.06
SCARF1-208ENST00000574545 TOMM20LQ6UXN7 152 aa14.65□□□□□ -0.06
SCARF1-208ENST00000574545 DUSP18Q8NEJ0 188 aa14.65□□□□□ -0.06
SCARF1-208ENST00000574545 RNASE11Q8TAA1 199 aaKnown RBP14.65□□□□□ -0.06
SCARF1-208ENST00000574545 IL22RA2Q969J5 263 aa14.65□□□□□ -0.06
SCARF1-208ENST00000574545 RNF2Q99496 336 aa14.65□□□□□ -0.06
SCARF1-208ENST00000574545 RHPN1-AS1Q9BWJ2 59 aa14.65□□□□□ -0.06
SCARF1-208ENST00000574545 CORTO00230 105 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 YIF1AO95070 293 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 ZNF79Q15937 498 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 ODF3L2Q3SX64 289 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 FAM90A2PQ658T7 463 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 TMEM116Q8NCL8 245 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 SCGB3A2Q96PL1 93 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 FAM110AQ9BQ89 295 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 CACNG5Q9UF02 275 aa14.64□□□□□ -0.07
SCARF1-208ENST00000574545 TENM2Q9NT68 2774 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 LOC102724200A0A096LPH7 203 aaPredicted RBP14.63□□□□□ -0.07
SCARF1-208ENST00000574545 TRAV14DV4A0A0A6YYC5 116 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 CCDC190Q86UF4 302 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 GGTLC1Q9BX51 225 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 ZFAND3Q9H8U3 227 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 ENY2Q9NPA8 101 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 MCUBQ9NWR8 336 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 PRR13Q9NZ81 148 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 KCNIP3Q9Y2W7 256 aa14.63□□□□□ -0.07
SCARF1-208ENST00000574545 A0A1B0GU03 582 aa14.62□□□□□ -0.07
SCARF1-208ENST00000574545 CLN5O75503 358 aa14.62□□□□□ -0.07
SCARF1-208ENST00000574545 NMSQ5H8A3 153 aa14.62□□□□□ -0.07
SCARF1-208ENST00000574545 ZNF600Q6ZNG1 722 aa14.62□□□□□ -0.07
SCARF1-208ENST00000574545 OR4X1Q8NH49 305 aa14.62□□□□□ -0.07
SCARF1-208ENST00000574545 TMEM170AQ8WVE7 144 aa14.62□□□□□ -0.07
SCARF1-208ENST00000574545 UBQLN2Q9UHD9 624 aa14.62□□□□□ -0.07
SCARF1-208ENST00000574545 IGHV3-49A0A0A0MS15 119 aa14.61□□□□□ -0.07
SCARF1-208ENST00000574545 ZNF701M0R085 212 aaPredicted RBP14.61□□□□□ -0.07
SCARF1-208ENST00000574545 HTR2BP41595 481 aa14.61□□□□□ -0.07
SCARF1-208ENST00000574545 C2orf83Q53S99 150 aa14.61□□□□□ -0.07
SCARF1-208ENST00000574545 LILRB2Q8N423 598 aa14.61□□□□□ -0.07
SCARF1-208ENST00000574545 VSIRQ9H7M9 311 aa14.61□□□□□ -0.07
SCARF1-208ENST00000574545 PUS1Q9Y606 427 aaKnown RBP eCLIP14.61□□□□□ -0.07
SCARF1-208ENST00000574545 IGHV3OR16-13A0A075B7E8 117 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 IGHV3-74A0A0B4J1X5 117 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 A0A0B4J2A0 478 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 CCDC160A6NGH7 325 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 OR4C46A6NHA9 309 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 APOHP02749 345 aaPredicted RBP14.6□□□□□ -0.07
SCARF1-208ENST00000574545 AKR1C4P17516 323 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 OPRK1P41145 380 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 PYDC2Q56P42 97 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 LYZL2Q7Z4W2 148 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 OVOL2Q9BRP0 275 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 GINS3Q9BRX5 216 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 HEYLQ9NQ87 328 aaPredicted RBP14.6□□□□□ -0.07
SCARF1-208ENST00000574545 SHPKQ9UHJ6 478 aa14.6□□□□□ -0.07
SCARF1-208ENST00000574545 IGKV1-17P01599 117 aa14.59□□□□□ -0.07
SCARF1-208ENST00000574545 SULT1A3P0DMM9 295 aa14.59□□□□□ -0.07
SCARF1-208ENST00000574545 SULT1A4P0DMN0 295 aa14.59□□□□□ -0.07
SCARF1-208ENST00000574545 ZFAND6Q6FIF0 208 aa14.59□□□□□ -0.07
SCARF1-208ENST00000574545 TOMM5Q8N4H5 51 aa14.59□□□□□ -0.07
SCARF1-208ENST00000574545 ST8SIA2Q92186 375 aa14.59□□□□□ -0.07
SCARF1-208ENST00000574545 HYDINQ4G0P3 5121 aa14.59□□□□□ -0.07
SCARF1-208ENST00000574545 S100A5P33763 92 aa14.58□□□□□ -0.08
SCARF1-208ENST00000574545 FAUP35544 74 aaKnown RBP14.58□□□□□ -0.08
SCARF1-208ENST00000574545 DEDD2Q8WXF8 326 aa14.58□□□□□ -0.08
SCARF1-208ENST00000574545 HSPB7Q9UBY9 170 aa14.58□□□□□ -0.08
SCARF1-208ENST00000574545 CEBPZOSA8MTT3 80 aa14.57□□□□□ -0.08
SCARF1-208ENST00000574545 CCR6P51684 374 aa14.57□□□□□ -0.08
SCARF1-208ENST00000574545 AP3S2P59780 193 aa14.57□□□□□ -0.08
SCARF1-208ENST00000574545 PRSS54Q6PEW0 395 aa14.57□□□□□ -0.08
SCARF1-208ENST00000574545 SLC24A4Q8NFF2 622 aa14.57□□□□□ -0.08
SCARF1-208ENST00000574545 RNASEH2CQ8TDP1 164 aaKnown RBP14.57□□□□□ -0.08
SCARF1-208ENST00000574545 CACFD1Q9UGQ2 172 aa14.57□□□□□ -0.08
SCARF1-208ENST00000574545 CD5P06127 495 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 IGLC1P0CG04 106 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 ANXA3P12429 323 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 TNFRSF9Q07011 255 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 SMCO1Q147U7 214 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 TIGITQ495A1 244 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 TMEM128Q5BJH2 165 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 TCF24Q7RTU0 167 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 LGI3Q8N145 548 aa14.56□□□□□ -0.08
SCARF1-208ENST00000574545 TRAV30A0A087WSZ9 112 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 KIR2DL5BA0A0G2JN68 375 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 KIR2DL5BA0A0G2JPC4 375 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 RPS10-NUDT3A0A1W2PQS6 291 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 DFFBO76075 338 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 NXPH3O95157 252 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 CRYBB3P26998 211 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 Q6ZWC4 215 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 WFDC3Q8IUB2 231 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 KIR2DL5AQ8N109 375 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 LRTM2Q8N967 370 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 KIR2DL5BQ8NHK3 375 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 SLC25A21Q9BQT8 299 aaPredicted RBP14.55□□□□□ -0.08
SCARF1-208ENST00000574545 SRRQ9GZT4 340 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 ALMS1Q8TCU4 4167 aa14.55□□□□□ -0.08
SCARF1-208ENST00000574545 IGKV3-7A0A075B6H7 116 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 PITX3O75364 302 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 SLC25A4P12235 298 aa14.54□□□□□ -0.08
SCARF1-208ENST00000574545 NPY1RP25929 384 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms