RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ERGIC3Q9Y282 383 aa0.36□□□□□ -2.35
CDC27-216ENST00000574304 RIC1Q4ADV7 1423 aa0.36□□□□□ -2.35
CDC27-216ENST00000574304 CASP8AP2Q9UKL3 1982 aa0.36□□□□□ -2.35
CDC27-216ENST00000574304 USP24Q9UPU5 2620 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 TRAV9-1A0A075B6T8 112 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 BUB1B-PAK6H3BSN5 160 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 FAAHO00519 579 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 INE1O15225 51 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 TGOLN2O43493 480 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 DCTN3O75935 186 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 DNAL4O96015 105 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 OR5G3P0C626 314 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 COX6A1P12074 109 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 TPM4P67936 248 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 DEFB113Q30KQ7 82 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 LPCAT3Q6P1A2 487 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 SPATA8Q6RVD6 105 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 CLECL1Q8IZS7 167 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 OR52R1Q8NGF1 315 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 PATE1Q8WXA2 126 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 TOMM6Q96B49 74 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 NIPSNAP1Q9BPW8 284 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 LLPHQ9BRT6 129 aaKnown RBP0.35□□□□□ -2.35
CDC27-216ENST00000574304 PRTFDC1Q9NRG1 225 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 RASL12Q9NYN1 266 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 ATP6V1DQ9Y5K8 247 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 MCM3APO60318 1980 aa0.35□□□□□ -2.35
CDC27-216ENST00000574304 TRAV12-1A0A0B4J245 112 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 KCNK1O00180 336 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 PSMD12O00232 456 aaPredicted RBP0.34□□□□□ -2.36
CDC27-216ENST00000574304 TCL1BO95988 128 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 CALB1P05937 261 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 RPS20P60866 119 aaKnown RBP0.34□□□□□ -2.36
CDC27-216ENST00000574304 SPCS3P61009 180 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 SNRPD2P62316 118 aaKnown RBP0.34□□□□□ -2.36
CDC27-216ENST00000574304 C1orf137Q5JT78 98 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 TMEM86BQ8N661 226 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 MRPS26Q9BYN8 205 aaKnown RBP0.34□□□□□ -2.36
CDC27-216ENST00000574304 MIXL1Q9H2W2 232 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 OSTCQ9NRP0 149 aa0.34□□□□□ -2.36
CDC27-216ENST00000574304 CNTRLQ7Z7A1 2325 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 APCP25054 2843 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 C9orf84Q5VXU9 1444 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 EXOC1LA0A1B0GW35 172 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 ZNF736B4DX44 427 aaPredicted RBP0.33□□□□□ -2.36
CDC27-216ENST00000574304 PROSCO94903 275 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 IFNA10P01566 189 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 RPL5P46777 297 aaKnown RBP0.33□□□□□ -2.36
CDC27-216ENST00000574304 MPV17LQ2QL34 196 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 SPRNQ5BIV9 151 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 SOSTDC1Q6X4U4 206 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 C20orf196Q8IYI0 205 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 PTH2Q96A98 100 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 GPR146Q96CH1 333 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 NKIRAS1Q9NYS0 192 aa0.33□□□□□ -2.36
CDC27-216ENST00000574304 ECM29Q5VYK3 1845 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 OR2B3O76000 313 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 CRYZL1O95825 349 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 HIST1H1TP22492 207 aaPredicted RBP0.32□□□□□ -2.36
CDC27-216ENST00000574304 CDC42P60953 191 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 SPOPLQ6IQ16 392 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 C3orf56Q8N813 242 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 OR13D1Q8NGV5 346 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 OR10J5Q8NHC4 309 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 TMEM70Q9BUB7 260 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 SLC35A3Q9Y2D2 325 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 TMEM56-RWDD3S4R434 201 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 E9PCH4 1651 aa0.32□□□□□ -2.36
CDC27-216ENST00000574304 HECW1Q76N89 1606 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 CCL25O15444 150 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 CD79AP11912 226 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 S100A4P26447 101 aaKnown RBP0.31□□□□□ -2.36
CDC27-216ENST00000574304 PSME3P61289 254 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 GKN2Q86XP6 184 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 OR51V1Q9H2C8 321 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 EPDR1Q9UM22 224 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 MTUS2Q5JR59 1369 aa0.31□□□□□ -2.36
CDC27-216ENST00000574304 ZNF106Q9H2Y7 1883 aaKnown RBP0.31□□□□□ -2.36
CDC27-216ENST00000574304 PEAK1Q9H792 1746 aa0.3□□□□□ -2.36
CDC27-216ENST00000574304 A0A1W2PPM0 123 aa0.3□□□□□ -2.36
CDC27-216ENST00000574304 KLF7O75840 302 aaPredicted RBP0.3□□□□□ -2.36
CDC27-216ENST00000574304 EFNA4P52798 201 aa0.3□□□□□ -2.36
CDC27-216ENST00000574304 CDKL4Q5MAI5 379 aa0.3□□□□□ -2.36
CDC27-216ENST00000574304 TRAPPC6BQ86SZ2 158 aa0.3□□□□□ -2.36
CDC27-216ENST00000574304 DDI1Q8WTU0 396 aa0.3□□□□□ -2.36
CDC27-216ENST00000574304 OR52E6Q96RD3 313 aa0.3□□□□□ -2.36
CDC27-216ENST00000574304 C6orf62Q9GZU0 229 aaPredicted RBP0.3□□□□□ -2.36
CDC27-216ENST00000574304 WRNQ14191 1432 aaPredicted RBP eCLIP0.3□□□□□ -2.36
CDC27-216ENST00000574304 TAF1LQ8IZX4 1826 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 ADGRB2O60241 1585 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 PLXND1Q9Y4D7 1925 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 OR4C46A6NHA9 309 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 OR2J2O76002 312 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 HIST1H1EP10412 219 aaKnown RBP0.29□□□□□ -2.36
CDC27-216ENST00000574304 PSG9Q00887 426 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 OR2F1Q13607 317 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 HIST3H3Q16695 136 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 BRMS1LQ5PSV4 323 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 LINC00301Q8NCQ3 95 aa0.29□□□□□ -2.36
CDC27-216ENST00000574304 C4orf3Q8WVX3 66 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms