RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 A0A1B0GXF2 115 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 A0A1W2PPB8 328 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 KIR3DP1A8MWS1 328 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 LY6LH3BQJ8 138 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 H7BYZ3 331 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 J3QR89 54 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 GNGT2O14610 69 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 OVOL1O14753 267 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 REM1O75628 298 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 HLA-DQB1P01920 261 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 ATP5G1P05496 136 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 GPX1P07203 203 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 TLX1NBP0CAT3 122 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 ZNF728P0DKX0 622 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 LINC00694P0DN24 101 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 CPMP14384 443 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 HIST1H1DP16402 221 aaKnown RBP2.68□□□□□ -1.98
NUP88-208ENST00000574087 ZNF14P17017 642 aaPredicted RBP2.68□□□□□ -1.98
NUP88-208ENST00000574087 PFN2P35080 140 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 RPL22P35268 128 aaKnown RBP2.68□□□□□ -1.98
NUP88-208ENST00000574087 PPICP45877 212 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 NCBP2P52298 156 aaKnown RBP eCLIP2.68□□□□□ -1.98
NUP88-208ENST00000574087 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 RPS24P62847 133 aaKnown RBP2.68□□□□□ -1.98
NUP88-208ENST00000574087 RPS21P63220 83 aaKnown RBP2.68□□□□□ -1.98
NUP88-208ENST00000574087 SLC38A11Q08AI6 406 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 TMEM267Q0VDI3 215 aaPredicted RBP2.68□□□□□ -1.98
NUP88-208ENST00000574087 PRDX4Q13162 271 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 IL15RAQ13261 267 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 DHRS2Q13268 280 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 MOBPQ13875 183 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 BATFQ16520 125 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 C12orf74Q32Q52 190 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 HRCT1Q6UXD1 115 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 Q6ZR03 302 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 Q6ZRU5 148 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 GTF2H5Q6ZYL4 71 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 TCF23Q7RTU1 214 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 SGPP2Q8IWX5 399 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 C15orf56Q8N910 161 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 OR51A4Q8NGJ6 313 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 OR10D4PQ8NGN7 298 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 OR8S1Q8NH09 359 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 UBALD1Q8TB05 177 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 CT55Q8WUE5 264 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 OR4C12Q96R67 309 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 GABARAPL3Q9BY60 117 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 CYSLTR1Q9Y271 337 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 KLF13Q9Y2Y9 288 aaPredicted RBP2.68□□□□□ -1.98
NUP88-208ENST00000574087 INSIG2Q9Y5U4 225 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 IER3IP1Q9Y5U9 82 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 PTPRMP28827 1452 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 NRKQ7Z2Y5 1582 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 USP54Q70EL1 1684 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 PTPRFP10586 1907 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 NUP214P35658 2090 aaPredicted RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 FER1L6Q2WGJ9 1857 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 ADAMTSL1Q8N6G6 1762 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 LOC102724200A0A096LPH7 203 aaPredicted RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 TRAV8-4A0A0B4J246 113 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 IGKV6-21A0A0C4DH24 114 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 LOC107984640A0A0U1RRK4 108 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 C7orf66A4D0T2 115 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 HMSDA8MTL9 139 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 C8orf87E5RJ46 101 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 NPFFO15130 113 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 PLA2G10O15496 165 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 LYRM1O43325 122 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 PGLYRP1O75594 196 aaPredicted RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 PROSCO94903 275 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 OR2A4O95047 310 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 P01737 135 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 CTSDP07339 412 aaPredicted RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 NMBP08949 121 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 SLC35G6P0C7Q6 338 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 IGLC6P0CF74 106 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 P0DMU3 169 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 FAM231AP0DMU4 169 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 FAM231CP0DMU5 169 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 GZMBP10144 247 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 NTF3P20783 257 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 RPS4Y1P22090 263 aaKnown RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 NFYAP23511 347 aaPredicted RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 GADD45AP24522 165 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 SDC2P34741 201 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 MYCNOSP40205 109 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 AKR1C2P52895 323 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 GRB2P62993 217 aaKnown RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 HBG1P69891 147 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 HBG2P69892 147 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 HMGN3Q15651 99 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 AMMECR1LQ6DCA0 310 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 ZCCHC23Q6ZST2 131 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 LHFPL1Q86WI0 220 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 HIST3H2BBQ8N257 126 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 OR2T27Q8NH04 317 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 OR51E1Q8TCB6 317 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 GEMIN6Q8WXD5 167 aaKnown RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 CARD19Q96LW7 228 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 OR2A7Q96R45 310 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms