RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TRAV25A0A0B4J276 109 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 A0A0B4J293 547 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 TEX13DA0A0J9YY54 714 aaPredicted RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 OR11H12B2RN74 326 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 H3BMQ9 156 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 C3orf84H3BNL1 204 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 K7EIM0 57 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 NDUFA4O00483 81 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 B3GALNT1O75752 331 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 IFNA17P01571 189 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 IGKV1-5P01602 117 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 CTSGP08311 255 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 AKAIN1P0CW23 69 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 TNFSF8P32971 234 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 AKR1C2P52895 323 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 MFAP4P55083 255 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 SURF2Q15527 256 aaPredicted RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 TRIM16LQ309B1 348 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 ANKRD55Q3KP44 614 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 Q56UQ5 140 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 FAAP20Q6NZ36 180 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 LINC00322Q6ZN03 302 aaPredicted RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 RBPMS2Q6ZRY4 209 aaKnown RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 SLC16A13Q7RTY0 426 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 DEFB125Q8N687 156 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 OR13C8Q8NGS7 320 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 RRNAD1Q96FB5 475 aaKnown RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 TXN2Q99757 166 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 RTBDNQ9BSG5 229 aaPredicted RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 CHRDL1Q9BU40 450 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 PDCD10Q9BUL8 212 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 SLIRPQ9GZT3 109 aaKnown RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 PLEKHA3Q9HB20 300 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 GAR1Q9NY12 217 aaKnown RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 RSL24D1Q9UHA3 163 aaKnown RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 GPR132Q9UNW8 380 aa5.58□□□□□ -1.52
NUP88-205ENST00000572809 C14orf166Q9Y224 244 aaKnown RBP5.58□□□□□ -1.52
NUP88-205ENST00000572809 TENM3Q9P273 2699 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 ANKRD20A5PA0PJZ0 165 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 FABP12A6NFH5 140 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 I3L2K1 104 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 K7EMT4 169 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 NUPL2O15504 423 aaKnown RBP5.57□□□□□ -1.52
NUP88-205ENST00000572809 ST8SIA3O43173 380 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 GSTZ1O43708 216 aaPredicted RBP5.57□□□□□ -1.52
NUP88-205ENST00000572809 CDS2O95674 445 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 MT-CO2P00403 227 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 P0C879 139 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 UCP1P25874 307 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 SNCAP37840 140 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 ETV6P41212 452 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 DHODHQ02127 395 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 SPINK9Q5DT21 86 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 BTNL8Q6UX41 500 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 TMEM61Q8N0U2 210 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 ZNF114Q8NC26 417 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 OR52B4Q8NGK2 314 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 OR4C16Q8NGL9 310 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 MCFD2Q8NI22 146 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 RNASE11Q8TAA1 199 aaKnown RBP5.57□□□□□ -1.52
NUP88-205ENST00000572809 MUC7Q8TAX7 377 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 GLYATL2Q8WU03 294 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 TMEM190Q8WZ59 177 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 ISOC1Q96CN7 298 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 PRRT1Q99946 306 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 SOSTQ9BQB4 213 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 C20orf24Q9BUV8 137 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 NXF2Q9GZY0 626 aaKnown RBP5.57□□□□□ -1.52
NUP88-205ENST00000572809 TMEM222Q9H0R3 208 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 SLC25A32Q9H2D1 315 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 C5orf66Q9H5L9 145 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 DAZ1Q9NQZ3 744 aaKnown RBP5.57□□□□□ -1.52
NUP88-205ENST00000572809 CEPT1Q9Y6K0 416 aa5.57□□□□□ -1.52
NUP88-205ENST00000572809 A0A0G2JRQ6 117 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 RBMY1BA6NDE4 496 aaKnown RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 RBMY1EA6NEQ0 496 aaKnown RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 CCDC160A6NGH7 325 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 INS-IGF2F8WCM5 200 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 IGHV3-48P01763 117 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 OR5AC1P0C628 307 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 RBMY1DP0C7P1 496 aaKnown RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 FCGR2BP31994 310 aaPredicted RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 SUB1P53999 127 aaKnown RBP eCLIP5.56□□□□□ -1.52
NUP88-205ENST00000572809 RELQ04864 619 aaPredicted RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 LAMTOR1Q6IAA8 161 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 FAM219AQ8IW50 185 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 SELENOHQ8IZQ5 122 aaKnown RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 SLC35G3Q8N808 338 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 DUSP18Q8NEJ0 188 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 OR51S1Q8NGJ8 323 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 PINX1Q96BK5 328 aaKnown RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 SCGB3A2Q96PL1 93 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 WFDC10AQ9H1F0 79 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 NAA60Q9H7X0 242 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 SRD5A3Q9H8P0 318 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 ENY2Q9NPA8 101 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms