RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ARPC5O15511 151 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 CST7O76096 145 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 IGHG4P01861 327 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 PRH1P02810 166 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 CXCL2P19875 107 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 SULT1A1P50225 295 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 SUB1P53999 127 aaKnown RBP eCLIP10.65□□□□□ -0.7
RPAIN-209ENST00000571558 NHLH2Q02577 135 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 ACOT7LQ6ZUV0 252 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 BSCL2Q96G97 398 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-209ENST00000571558 SLC25A31Q9H0C2 315 aa10.65□□□□□ -0.7
RPAIN-209ENST00000571558 A0A1W2PRX2 142 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 TCRBV4S1A1TA0A5B7 111 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 EIF2B2P49770 351 aaKnown RBP10.64□□□□□ -0.71
RPAIN-209ENST00000571558 BAXQ07812 192 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 LAMTOR1Q6IAA8 161 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 ETV3LQ6ZN32 361 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 C9orf62Q8N4C0 152 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 INO80EQ8NBZ0 244 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-209ENST00000571558 OR1L6Q8NGR2 347 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 RNASEH2CQ8TDP1 164 aaKnown RBP10.64□□□□□ -0.71
RPAIN-209ENST00000571558 HSPB11Q9Y547 144 aa10.64□□□□□ -0.71
RPAIN-209ENST00000571558 H3BUA1 57 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 I3L2K1 104 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 NKX2-5P52952 324 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-209ENST00000571558 RAB11AP62491 216 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 OR2F1Q13607 317 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 ZNF345Q14585 488 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 LGALSLQ3ZCW2 172 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-209ENST00000571558 C10orf99Q6UWK7 81 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-209ENST00000571558 STX12Q86Y82 276 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 GON7Q9BXV9 100 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 MFFQ9GZY8 342 aa10.63□□□□□ -0.71
RPAIN-209ENST00000571558 FNDC4Q9H6D8 234 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-209ENST00000571558 K7EIM0 57 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 SCAF4O95104 1147 aaKnown RBP10.62□□□□□ -0.71
RPAIN-209ENST00000571558 IFNA4P05014 189 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 DEFA4P12838 97 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 PSMB8P28062 276 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-209ENST00000571558 NUP62P37198 522 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-209ENST00000571558 MLANAQ16655 118 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 OR8G2PQ6IF36 304 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 SLC25A24Q6NUK1 477 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 TMEM217Q8N7C4 229 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
RPAIN-209ENST00000571558 PAIP2BQ9ULR5 123 aaKnown RBP10.62□□□□□ -0.71
RPAIN-209ENST00000571558 BIRC6Q9NR09 4857 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 EPPK1P58107 5090 aaKnown RBP10.61□□□□□ -0.71
RPAIN-209ENST00000571558 PSMB11A5LHX3 300 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 CORTO00230 105 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 NDUFB8O95169 186 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 HNRNPCP07910 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
RPAIN-209ENST00000571558 HIST1H1BP16401 226 aaKnown RBP10.61□□□□□ -0.71
RPAIN-209ENST00000571558 S100A11P31949 105 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 GPX4P36969 197 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-209ENST00000571558 AP2S1P53680 142 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-209ENST00000571558 DLK1P80370 383 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 SLC38A11Q08AI6 406 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 LINC00482Q8N8I6 264 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 RNF152Q8N8N0 203 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 OR10P1Q8NGE3 313 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 OR5C1Q8NGR4 320 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 MISP3Q96FF7 219 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 GGACTQ9BVM4 153 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 KLK15Q9H2R5 256 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 WFDC1Q9HC57 220 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 FBXL17Q9UF56 701 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 RYR2Q92736 4967 aa10.61□□□□□ -0.71
RPAIN-209ENST00000571558 A0A0D9SG52 128 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 CYB5BO43169 146 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 OR2J3O76001 311 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 MT-CO2P00403 227 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 HBG1P69891 147 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 HBG2P69892 147 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 RHOGP84095 191 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 DEFA5Q01523 94 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 FOXE3Q13461 319 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 EXOSC2Q13868 293 aaKnown RBP10.6□□□□□ -0.71
RPAIN-209ENST00000571558 KIAA0141Q14154 515 aaPredicted RBP10.6□□□□□ -0.71
RPAIN-209ENST00000571558 VWC2Q2TAL6 325 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 CACNG8Q8WXS5 425 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 PINX1Q96BK5 328 aaKnown RBP10.6□□□□□ -0.71
RPAIN-209ENST00000571558 MS4A10Q96PG2 267 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 MRPL36Q9P0J6 103 aaKnown RBP10.6□□□□□ -0.71
RPAIN-209ENST00000571558 TENM2Q9NT68 2774 aa10.6□□□□□ -0.71
RPAIN-209ENST00000571558 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
RPAIN-209ENST00000571558 FNDC10F2Z333 226 aa10.59□□□□□ -0.71
RPAIN-209ENST00000571558 OPRK1P41145 380 aa10.59□□□□□ -0.71
RPAIN-209ENST00000571558 RAB9AP51151 201 aa10.59□□□□□ -0.71
RPAIN-209ENST00000571558 SLC35B1P78383 322 aa10.59□□□□□ -0.71
RPAIN-209ENST00000571558 GAMTQ14353 236 aa10.59□□□□□ -0.71
RPAIN-209ENST00000571558 CASC10Q5T4H9 136 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms