RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 IGHV3OR16-8A0A075B7F1 116 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 CXorf65A6NEN9 183 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 DNASE2O00115 360 aaPredicted RBP7.23□□□□□ -1.25
CIITA-207ENST00000571545 CTDSPLO15194 276 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 ZNF207O43670 478 aaKnown RBP7.23□□□□□ -1.25
CIITA-207ENST00000571545 AKAIN1P0CW23 69 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 PI3P19957 117 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 HTR2BP41595 481 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 RPL5P46777 297 aaKnown RBP7.23□□□□□ -1.25
CIITA-207ENST00000571545 SPCS3P61009 180 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 ETFRF1Q6IPR1 90 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 LYG2Q86SG7 212 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 RNF183Q96D59 192 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 METTL26Q96S19 204 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 NAA50Q9GZZ1 169 aaKnown RBP7.23□□□□□ -1.25
CIITA-207ENST00000571545 TMEM222Q9H0R3 208 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.23□□□□□ -1.25
CIITA-207ENST00000571545 RSL24D1Q9UHA3 163 aaKnown RBP7.23□□□□□ -1.25
CIITA-207ENST00000571545 SCP2D1Q9UJQ7 156 aa7.23□□□□□ -1.25
CIITA-207ENST00000571545 KLK5Q9Y337 293 aaPredicted RBP7.23□□□□□ -1.25
CIITA-207ENST00000571545 A0A0B4J293 547 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 A0A0J9YWU9 116 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 MPTX1A8MV57 137 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 CLN5O75503 358 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 CDS2O95674 445 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 OR5AC1P0C628 307 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 SLC25A4P12235 298 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 NPPCP23582 126 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 TMBIM6P55061 237 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 IL18Q14116 193 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 AARDQ4LEZ3 155 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 TMEM41BQ5BJD5 291 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 TOMM20LQ6UXN7 152 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 TCF24Q7RTU0 167 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 OR4D10Q8NGI6 311 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 OR4X1Q8NH49 305 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 MARCH1Q8TCQ1 289 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 RNASEH2CQ8TDP1 164 aaKnown RBP7.22□□□□□ -1.25
CIITA-207ENST00000571545 IL22RA2Q969J5 263 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 GRAMD2BQ96HH9 432 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 DIRAS2Q96HU8 199 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 CSTL1Q9H114 145 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 VSIRQ9H7M9 311 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 NAA60Q9H7X0 242 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 MAP6D1Q9H9H5 199 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 KCNIP3Q9Y2W7 256 aa7.22□□□□□ -1.25
CIITA-207ENST00000571545 PUS1Q9Y606 427 aaKnown RBP eCLIP7.22□□□□□ -1.25
CIITA-207ENST00000571545 DNAH7Q8WXX0 4024 aa7.21□□□□□ -1.25
CIITA-207ENST00000571545 TMEM50AO95807 157 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 RNASE2P10153 161 aaKnown RBP7.21□□□□□ -1.26
CIITA-207ENST00000571545 ANXA3P12429 323 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 FAUP35544 74 aaKnown RBP7.21□□□□□ -1.26
CIITA-207ENST00000571545 NUP62P37198 522 aaPredicted RBP7.21□□□□□ -1.26
CIITA-207ENST00000571545 ALDH3B2P48448 385 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.26
CIITA-207ENST00000571545 SRPXP78539 464 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 BSXQ3C1V8 233 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 SPINK9Q5DT21 86 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 FAM90A2PQ658T7 463 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 TMEM230Q96A57 120 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 MFFQ9GZY8 342 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 RYR3Q15413 4870 aa7.21□□□□□ -1.26
CIITA-207ENST00000571545 HUWE1Q7Z6Z7 4374 aaKnown RBP7.2□□□□□ -1.26
CIITA-207ENST00000571545 CRYM-AS1A6NIL9 109 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 GSTZ1O43708 216 aaPredicted RBP7.2□□□□□ -1.26
CIITA-207ENST00000571545 IGHV3-48P01763 117 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 RPL35AP18077 110 aaKnown RBP7.2□□□□□ -1.26
CIITA-207ENST00000571545 ETV6P41212 452 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 TFPI2P48307 235 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 AP2S1P53680 142 aaPredicted RBP7.2□□□□□ -1.26
CIITA-207ENST00000571545 AP3S2P59780 193 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 IZUMO4Q1ZYL8 232 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 SP6Q3SY56 376 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 C2orf83Q53S99 150 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 TMEM268Q5VZI3 342 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 CLVS1Q8IUQ0 354 aaPredicted RBP7.2□□□□□ -1.26
CIITA-207ENST00000571545 SLC24A4Q8NFF2 622 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 OR4C16Q8NGL9 310 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 OR1S2Q8NGQ3 325 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 GLYATL2Q8WU03 294 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 ST8SIA2Q92186 375 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 MS4A6AQ9H2W1 248 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 MIXL1Q9H2W2 232 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 C11orf68Q9H3H3 251 aaKnown RBP7.2□□□□□ -1.26
CIITA-207ENST00000571545 HEYLQ9NQ87 328 aaPredicted RBP7.2□□□□□ -1.26
CIITA-207ENST00000571545 CACNG5Q9UF02 275 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 PFDN2Q9UHV9 154 aa7.2□□□□□ -1.26
CIITA-207ENST00000571545 IGKV3-7A0A075B6H7 116 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 IGHV3-49A0A0A0MS15 119 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 HELTA6NFD8 242 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 CEBPZOSA8MTT3 80 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 CTDSP2O14595 271 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 SULT1A3P0DMM9 295 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 SULT1A4P0DMN0 295 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 CRYBB3P26998 211 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 P2RY1P47900 373 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 ATP5IP56385 69 aaPredicted RBP7.19□□□□□ -1.26
CIITA-207ENST00000571545 YPEL3P61236 119 aaPredicted RBP7.19□□□□□ -1.26
CIITA-207ENST00000571545 PMS2P11Q13670 270 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms