RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 C14orf166Q9Y224 244 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 CSMD3Q7Z407 3707 aa9.21□□□□□ -0.93
CTDNEP1-205ENST00000570828 A0A0B4J293 547 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 DISC1C4P0D8 188 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 CTDSP2O14595 271 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 ST8SIA3O43173 380 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 NOL3O60936 208 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 IGHV3-48P01763 117 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 CTSDP07339 412 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 P0C879 139 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 UCP1P25874 307 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 NPBWR1P48145 328 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 APOC4P55056 127 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 IL18Q14116 193 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 SP6Q3SY56 376 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 FAAP20Q6NZ36 180 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 NXF2Q9GZY0 626 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 CCDC59Q9P031 241 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 SMPXQ9UHP9 88 aa9.21□□□□□ -0.94
CTDNEP1-205ENST00000570828 IGHV7-4-1A0A0J9YVY3 117 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 TEX13DA0A0J9YY54 714 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 INS-IGF2F8WCM5 200 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 CORTO00230 105 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 BMI1P35226 326 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 SUB1P53999 127 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 SURF2Q15527 256 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 ODF3L2Q3SX64 289 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 TMEM116Q8NCL8 245 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 DUSP18Q8NEJ0 188 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 DIRAS2Q96HU8 199 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 OR10C1Q96KK4 312 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 BCL7BQ9BQE9 202 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 GINS3Q9BRX5 216 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 RHPN1-AS1Q9BWJ2 59 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 RABL2AQ9UBK7 228 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 RABL2BQ9UNT1 228 aa9.2□□□□□ -0.94
CTDNEP1-205ENST00000570828 IGHV3-49A0A0A0MS15 119 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 CHEK1O14757 476 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 OR5AC1P0C628 307 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 AKAIN1P0CW23 69 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 ETV6P41212 452 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 TMBIM6P55061 237 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 FAM219AQ8IW50 185 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 OR4C16Q8NGL9 310 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 DYNC2LI1Q8TCX1 351 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 RNF2Q99496 336 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 PRRT1Q99946 306 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 C6orf62Q9GZU0 229 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 TMEM222Q9H0R3 208 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
CTDNEP1-205ENST00000570828 A0A0G2JRQ6 117 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 CTDSPLO15194 276 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 SCGB2A1O75556 95 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 RNASE2P10153 161 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 OPRK1P41145 380 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 ZNF600Q6ZNG1 722 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 OVOL2Q9BRP0 275 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 KRTAP4-2Q9BYR5 136 aa9.18□□□□□ -0.94
CTDNEP1-205ENST00000570828 IGKV3-7A0A075B6H7 116 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 IGHV3OR16-13A0A075B7E8 117 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 IGHV3-74A0A0B4J1X5 117 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 KIR2DL5BA0A0G2JN68 375 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 KIR2DL5BA0A0G2JPC4 375 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 UBE2CO00762 179 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 JTBO76095 146 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 CDS2O95674 445 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 HNRNPCP07910 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 TFPI2P48307 235 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 SPCS3P61009 180 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 DHODHQ02127 395 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 DEFB135Q30KP9 77 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 PVRIGQ6DKI7 326 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 Q6ZWC4 215 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 KIR2DL5AQ8N109 375 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 STPG3Q8N7X2 389 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 CLRN3Q8NCR9 226 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 LYSTQ99698 3801 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 RTBDNQ9BSG5 229 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 RSL24D1Q9UHA3 163 aaKnown RBP9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 TP53TG1Q9Y2A0 90 aa9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTDNEP1-205ENST00000570828 CRYM-AS1A6NIL9 109 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 SPRY2O43597 315 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 CD5P06127 495 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 RPL5P46777 297 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 CMC4P56277 68 aaPredicted RBP9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 PAFAH1B2P68402 229 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 AARDQ4LEZ3 155 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 TMEM268Q5VZI3 342 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 Q6ZRM9 215 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 TCF24Q7RTU0 167 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 OR51S1Q8NGJ8 323 aa9.16□□□□□ -0.94
CTDNEP1-205ENST00000570828 OR52E5Q8NH55 327 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms