RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 C22orf15Q8WYQ4 148 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 MCRIP2Q9BUT9 160 aaKnown RBP12.51□□□□□ -0.41
USP43-202ENST00000570475 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 S4R3C0 116 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 ATRXP46100 2492 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 UPK2O00526 184 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 NPSP0C0P6 89 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 CT45A6P0DMU7 189 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 CT45A5P0DMU8 189 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 CT45A7P0DMV0 189 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 GLRXP35754 106 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 ANKRD11Q6UB99 2663 aaPredicted RBP12.51□□□□□ -0.41
USP43-202ENST00000570475 ADGRG4Q8IZF6 3080 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 DPRXA6NFQ7 191 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 KLK10O43240 276 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 ZNF883P0CG24 379 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 PDLIM4P50479 330 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 LYZP61626 148 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 PDPNQ86YL7 162 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 DIRC2Q96SL1 478 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 V9GYV3 84 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 DSCAMO60469 2012 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 A0A1W2PN81 502 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 TNFSF13O75888 250 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 IGHV1-46P01743 117 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 RBP4P02753 201 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 SIAH2O43255 324 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 SUB1P53999 127 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP43-202ENST00000570475 BPIFB3P59826 476 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 LINC00305Q7Z4B0 112 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 TET2Q6N021 2002 aaPredicted RBP12.5□□□□□ -0.41
USP43-202ENST00000570475 OR52E5Q8NH55 327 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 TMEM208Q9BTX3 173 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 PLSCR4Q9NRQ2 329 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 CDC42EP3Q9UKI2 254 aa12.5□□□□□ -0.41
USP43-202ENST00000570475 SH2D7A6NKC9 451 aaPredicted RBP12.49□□□□□ -0.41
USP43-202ENST00000570475 CORTO00230 105 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 ISLRO14498 428 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 NDUFB3O43676 98 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 CNIH1O95406 144 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 AMY1AP04745 511 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 RAB4AP20338 218 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 PMCHL2Q9BQD1 86 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 CLEC5AQ9NY25 188 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 TP53TG3Q9ULZ0 132 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 LAMA5O15230 3695 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 GPX1P07203 203 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 PRCDQ00LT1 54 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 MBNL2Q5VZF2 373 aaKnown RBP12.49□□□□□ -0.41
USP43-202ENST00000570475 TMEM14BQ9NUH8 114 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
USP43-202ENST00000570475 CHEK1O14757 476 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
USP43-202ENST00000570475 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 GAL3ST2Q9H3Q3 398 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 FOXA2Q9Y261 457 aaPredicted RBP12.49□□□□□ -0.41
USP43-202ENST00000570475 RNF114Q9Y508 228 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 SELENOKQ9Y6D0 94 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 ATMQ13315 3056 aa12.49□□□□□ -0.41
USP43-202ENST00000570475 ZNF891A8MT65 544 aaPredicted RBP12.48□□□□□ -0.41
USP43-202ENST00000570475 HIGD1CA8MV81 97 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 AREGP15514 252 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 DNLZQ5SXM8 178 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 E7EUB6 86 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 C3orf79P0CE67 100 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 TNFRSF1AP19438 455 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 CD69Q07108 199 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 SLAQ13239 276 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 RNF151Q2KHN1 245 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 SLC25A33Q9BSK2 321 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 TNFRSF19Q9NS68 423 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 RALYQ9UKM9 306 aaKnown RBP12.48□□□□□ -0.41
USP43-202ENST00000570475 F2RL2O00254 374 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 TPTE2P1Q5T6R2 138 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 C22orf34Q6ZV56 151 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 OR8B2Q96RD0 313 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 ASCL3Q9NQ33 180 aa12.48□□□□□ -0.41
USP43-202ENST00000570475 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 MUC21A0A0G2JKD1 596 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 MUC21A0A140T8X8 626 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 A0A1W2PS18 150 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 LYNX1G3V0Z9 82 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 DLL1O00548 723 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 LYNX1P0DP58 116 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 PTTG1IPP53801 180 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 MUC21Q5SSG8 566 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 TMEM108Q6UXF1 575 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 C1orf162Q8NEQ5 155 aaPredicted RBP12.47□□□□□ -0.41
USP43-202ENST00000570475 C1orf159Q96HA4 380 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 RNF2Q99496 336 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 ZNF324O75467 553 aaPredicted RBP12.47□□□□□ -0.41
USP43-202ENST00000570475 CX3CL1P78423 397 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 TIMM23BQ5SRD1 257 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 COL5A1-AS1Q5SY13 56 aa12.47□□□□□ -0.41
USP43-202ENST00000570475 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.41
USP43-202ENST00000570475 BMPR1BO00238 502 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms