RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 NPPCP23582 126 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 HLA-DMBP28068 263 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 OPRK1P41145 380 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 UCP3P55916 312 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 RBMY1FQ15415 496 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 TRIM16LQ309B1 348 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 TIGITQ495A1 244 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 ACTL10Q5JWF8 245 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 TMEM230Q96A57 120 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 METTL26Q96S19 204 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 PDCD10Q9BUL8 212 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 SCPEP1Q9HB40 452 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 FAM212BQ9NTI7 297 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 APLNQ9ULZ1 77 aa6.26□□□□□ -1.41
CTDNEP1-203ENST00000570385 A0A087WXM4 84 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 C3orf85A0A1B0GTC6 90 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 K7EQG2 157 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 CD3DP04234 171 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 CD5P06127 495 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 C4BPBP20851 252 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 P2RY1P47900 373 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 SUB1P53999 127 aaKnown RBP eCLIP6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 SCGB2B2Q4G0G5 96 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 RNASE10Q5GAN6 216 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 Q6ZRM9 215 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 ZNF767PQ75MW2 155 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 TRPT1Q86TN4 253 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 Q8NAQ8 132 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 OR4D10Q8NGI6 311 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 OR52I2Q8NH67 350 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 RNASE11Q8TAA1 199 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 FUNDC2Q9BWH2 189 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 TMEM231Q9H6L2 316 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 VCX3AQ9NNX9 186 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 ENY2Q9NPA8 101 aa6.25□□□□□ -1.41
CTDNEP1-203ENST00000570385 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 A0A1W2PS18 150 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 CLN5O75503 358 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 NXPH3O95157 252 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 IGKV1-17P01599 117 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 P0C879 139 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 RND3P61587 244 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 DHRS2Q13268 280 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 Q6ZTC4 211 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 LHFPL1Q86WI0 220 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 OR13C8Q8NGS7 320 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 OR4X1Q8NH49 305 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 COPZ2Q9P299 210 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 X6R8D5 127 aa6.24□□□□□ -1.41
CTDNEP1-203ENST00000570385 TRAV2A0A0B4J234 112 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 CORTO00230 105 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 OR5AC1P0C628 307 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 CRYBB3P26998 211 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 RORCP51449 518 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 RND2P52198 227 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 PSMG4Q5JS54 123 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 PVRIGQ6DKI7 326 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 FAAP20Q6NZ36 180 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 GSG1LQ6UXU4 331 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 MARCH1Q8TCQ1 289 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 DCANP1Q8TF63 244 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 RRNAD1Q96FB5 475 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 ZNF486Q96H40 463 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 NARS2Q96I59 477 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 ABHD1Q96SE0 405 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 SCRT1Q9BWW7 348 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 NAA50Q9GZZ1 169 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 EXTL2Q9UBQ6 330 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 CELA1Q9UNI1 258 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 HERC2O95714 4834 aa6.23□□□□□ -1.41
CTDNEP1-203ENST00000570385 IGHV4-4A0A075B6R2 117 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 C11orf94C9JXX5 98 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 INS-IGF2F8WCM5 200 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 ATG12O94817 140 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 TNFAIP8O95379 198 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 RAB3DO95716 219 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 IGLC1P0CG04 106 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 SPP1P10451 314 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 MIFP14174 115 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 UCP1P25874 307 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 DEFB1P60022 68 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 DHODHQ02127 395 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 MEF2DQ14814 521 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 MZT2AQ6P582 158 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 PRSS54Q6PEW0 395 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 MORN3Q6PF18 240 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 CENPSQ8N2Z9 138 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 ARRDC1Q8N5I2 433 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 CCDC71LQ8N9Z2 235 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 TERB2Q8NHR7 220 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 LHFPL5Q8TAF8 219 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 ZFAND1Q8TCF1 268 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 RAB40CQ96S21 281 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 HEYLQ9NQ87 328 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 PRR13Q9NZ81 148 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 XCL2Q9UBD3 114 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 MTFP1Q9UDX5 166 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 CACNG5Q9UF02 275 aa6.22□□□□□ -1.41
CTDNEP1-203ENST00000570385 TBC1D24Q9ULP9 559 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms