RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SMPXQ9UHP9 88 aa10.23□□□□□ -0.77
GTF3C1-211ENST00000569653 KCNIP3Q9Y2W7 256 aa10.23□□□□□ -0.77
GTF3C1-211ENST00000569653 VPS13DQ5THJ4 4388 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 K7EMT4 169 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 IFNA17P01571 189 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 INPP1P49441 399 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 ERHP84090 104 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 WFDC3Q8IUB2 231 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 APRG1Q8IVJ8 170 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 GLYATL2Q8WU03 294 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 MISP3Q96FF7 219 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 GALNT14Q96FL9 552 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 MRPL36Q9P0J6 103 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 DNAH10Q8IVF4 4471 aa10.22□□□□□ -0.77
GTF3C1-211ENST00000569653 IGHV3OR16-13A0A075B7E8 117 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 IGHV3-74A0A0B4J1X5 117 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 A0A0B4J293 547 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 PIGBOS1A0A0B4J2F0 54 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 C15orf62A8K5M9 175 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 CHEK1O14757 476 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 PLA2G10O15496 165 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 ST8SIA3O43173 380 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 JTBO76095 146 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 MT-CO2P00403 227 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 ANXA3P12429 323 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 RPL35AP18077 110 aaKnown RBP10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 FCGR2BP31994 310 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 BTCP35070 178 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 HOXA1P49639 335 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 TMEM268Q5VZI3 342 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 TRIQKQ629K1 86 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 FAM90A2PQ658T7 463 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 LYG2Q86SG7 212 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 LILRB2Q8N423 598 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 IL22RA2Q969J5 263 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 TMEM230Q96A57 120 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 OR10C1Q96KK4 312 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 TMEM56-RWDD3S4R434 201 aa10.21□□□□□ -0.77
GTF3C1-211ENST00000569653 A0A0G2JRQ6 117 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 LINC00854A0A1B0GVQ3 168 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 INS-IGF2F8WCM5 200 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 SPRY2O43597 315 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 APOHP02749 345 aaPredicted RBP10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 AKR1C4P17516 323 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 SRPXP78539 464 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 IFITM3Q01628 133 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 PMS2P11Q13670 270 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 Q6ZWC4 215 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 SELENOHQ8IZQ5 122 aaKnown RBP10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 LHFPL5Q8TAF8 219 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 S100ZQ8WXG8 99 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 LINC00476Q8WZB0 136 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 SLC25A21Q9BQT8 299 aaPredicted RBP10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 RHPN1-AS1Q9BWJ2 59 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 ENY2Q9NPA8 101 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
GTF3C1-211ENST00000569653 SNCAP37840 140 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 CCR6P51684 374 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 TNFRSF9Q07011 255 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 TMEM187Q14656 261 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 PVRIGQ6DKI7 326 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 TMED4Q7Z7H5 227 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 RNF183Q96D59 192 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 CCDC32Q9BV29 185 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 MAP6D1Q9H9H5 199 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
GTF3C1-211ENST00000569653 IGKV3-7A0A075B6H7 116 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 A0A1B0GU03 582 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 CORTO00230 105 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 NUPL2O15504 423 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 TFPI2P48307 235 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 SUB1P53999 127 aaKnown RBP eCLIP10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 APOC4P55056 127 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 MFAP4P55083 255 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 SPCS3P61009 180 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 RBMS2Q15434 407 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 AARDQ4LEZ3 155 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 TMEM128Q5BJH2 165 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 LAMTOR1Q6IAA8 161 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 TOMM20LQ6UXN7 152 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 LGI3Q8N145 548 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 FAM24BQ8N5W8 94 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 TMEM116Q8NCL8 245 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 OR52E5Q8NH55 327 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 ST8SIA2Q92186 375 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 PINX1Q96BK5 328 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 FNDC4Q9H6D8 234 aaPredicted RBP10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 CACNG5Q9UF02 275 aa10.18□□□□□ -0.78
GTF3C1-211ENST00000569653 IGHV3-66A0A0C4DH42 116 aa10.17□□□□□ -0.78
GTF3C1-211ENST00000569653 KIR2DL5BA0A0G2JN68 375 aa10.17□□□□□ -0.78
GTF3C1-211ENST00000569653 KIR2DL5BA0A0G2JPC4 375 aa10.17□□□□□ -0.78
GTF3C1-211ENST00000569653 CXorf65A6NEN9 183 aa10.17□□□□□ -0.78
GTF3C1-211ENST00000569653 NAP1L6A6NFF2 107 aa10.17□□□□□ -0.78
GTF3C1-211ENST00000569653 OR4C46A6NHA9 309 aa10.17□□□□□ -0.78
GTF3C1-211ENST00000569653 YIF1AO95070 293 aa10.17□□□□□ -0.78
GTF3C1-211ENST00000569653 SULT1A3P0DMM9 295 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms