RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MDFIQ99750 246 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 OR5AC2Q9NZP5 309 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 MBD2Q9UBB5 411 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 PEF1Q9UBV8 284 aaKnown RBP18.17■□□□□ 0.5
RAB40C-212ENST00000569575 PMS2P5A8MQ11 134 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 NUDT19A8MXV4 375 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 PRSS46E5RG02 174 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 HSPB1P04792 205 aaKnown RBP18.16■□□□□ 0.5
RAB40C-212ENST00000569575 LCNL1Q6ZST4 164 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 AKAP14Q86UN6 197 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 C11orf44Q8N8P7 122 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 KLHL30-AS1Q8NEE0 82 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 OR4F17Q8NGA8 305 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 BSCL2Q96G97 398 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-212ENST00000569575 SLC35E1Q96K37 410 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 OR4F4Q96R69 305 aa18.16■□□□□ 0.5
RAB40C-212ENST00000569575 TRAV14DV4A0A0A6YYC5 116 aa18.15■□□□□ 0.5
RAB40C-212ENST00000569575 METTL15P1P0C7V9 234 aa18.15■□□□□ 0.5
RAB40C-212ENST00000569575 SLC16A13Q7RTY0 426 aa18.15■□□□□ 0.5
RAB40C-212ENST00000569575 FNDC4Q9H6D8 234 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-212ENST00000569575 FBN1P35555 2871 aaKnown RBP18.14■□□□□ 0.49
RAB40C-212ENST00000569575 hCG_2014768A0A024R1R8 64 aa18.14■□□□□ 0.49
RAB40C-212ENST00000569575 MFSD2BA6NFX1 497 aa18.14■□□□□ 0.49
RAB40C-212ENST00000569575 FAM24AA6NFZ4 105 aa18.14■□□□□ 0.49
RAB40C-212ENST00000569575 ZP3P21754 424 aa18.14■□□□□ 0.49
RAB40C-212ENST00000569575 ACSM6Q6P461 480 aa18.14■□□□□ 0.49
RAB40C-212ENST00000569575 INO80EQ8NBZ0 244 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-212ENST00000569575 ST6GAL2Q96JF0 529 aa18.14■□□□□ 0.49
RAB40C-212ENST00000569575 GNB4Q9HAV0 340 aa18.14■□□□□ 0.49
RAB40C-212ENST00000569575 ADARB2-AS1A8MUL3 147 aa18.13■□□□□ 0.49
RAB40C-212ENST00000569575 CLN5O75503 358 aa18.13■□□□□ 0.49
RAB40C-212ENST00000569575 RPL12P30050 165 aaKnown RBP18.13■□□□□ 0.49
RAB40C-212ENST00000569575 MYCNOSP40205 109 aa18.13■□□□□ 0.49
RAB40C-212ENST00000569575 OR8G2PQ6IF36 304 aa18.13■□□□□ 0.49
RAB40C-212ENST00000569575 ZNF546Q86UE3 836 aa18.13■□□□□ 0.49
RAB40C-212ENST00000569575 HMSDA8MTL9 139 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 M0QZ24 198 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 NUPL2O15504 423 aaKnown RBP18.12■□□□□ 0.49
RAB40C-212ENST00000569575 GNG7O60262 68 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 GGCTO75223 188 aaKnown RBP18.12■□□□□ 0.49
RAB40C-212ENST00000569575 IGHV3-11P01762 117 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 CLEC3BP05452 202 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 Q56UQ5 140 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 DPF1Q92782 380 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 CCDC140Q96MF4 163 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 AQP10Q96PS8 301 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 NPVFQ9HCQ7 196 aa18.12■□□□□ 0.49
RAB40C-212ENST00000569575 A0A1B0GVG6 124 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 IGSF23A1L1A6 192 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 FABP1P07148 127 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 EWSR1Q01844 656 aaKnown RBP eCLIP18.11■□□□□ 0.498e-7■■■■□ 22.8
RAB40C-212ENST00000569575 ZNF616Q08AN1 781 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 GAMTQ14353 236 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 CLEC19AQ6UXS0 136 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 TMEM144Q7Z5S9 345 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 OR1N2Q8NGR9 330 aa18.11■□□□□ 0.49
RAB40C-212ENST00000569575 LINC01619G3V211 115 aa18.1■□□□□ 0.49
RAB40C-212ENST00000569575 TGOLN2O43493 480 aa18.1■□□□□ 0.49
RAB40C-212ENST00000569575 RELQ04864 619 aaPredicted RBP18.1■□□□□ 0.49
RAB40C-212ENST00000569575 SLC38A11Q08AI6 406 aa18.1■□□□□ 0.49
RAB40C-212ENST00000569575 FHL3Q13643 280 aa18.1■□□□□ 0.49
RAB40C-212ENST00000569575 OR11H1Q8NG94 326 aa18.1■□□□□ 0.49
RAB40C-212ENST00000569575 OR1S2Q8NGQ3 325 aa18.1■□□□□ 0.49
RAB40C-212ENST00000569575 HSPB11Q9Y547 144 aa18.1■□□□□ 0.49
RAB40C-212ENST00000569575 F8W735 103 aaPredicted RBP18.09■□□□□ 0.49
RAB40C-212ENST00000569575 G3V3Q6 166 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 CCL24O00175 119 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 CST7O76096 145 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 ARL3P36405 182 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 RND2P52198 227 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 VWC2Q2TAL6 325 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 NSUN5P1Q3KNT7 163 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 Q5BKY6 102 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 C8orf86Q6ZUL3 223 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 ACOT7LQ6ZUV0 252 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 ZC4H2Q9NQZ6 224 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 TNFSF18Q9UNG2 199 aa18.09■□□□□ 0.49
RAB40C-212ENST00000569575 DFFBO76075 338 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 CTSGP08311 255 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 GPR183P32249 361 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 YPEL3P61236 119 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-212ENST00000569575 MLANAQ16655 118 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 GPHB5Q86YW7 130 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 LILRB2Q8N423 598 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 THAP8Q8NA92 274 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 NPIPB3Q92617 1050 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 TMEM147Q9BVK8 224 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 UQCC1Q9NVA1 299 aa18.08■□□□□ 0.48
RAB40C-212ENST00000569575 FXYD6-FXYD2A0A087WZ82 144 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 IGHV3-21A0A0B4J1V1 117 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 A0A1W2PRX2 142 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 ANKRD34BA5PLL1 514 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 CFDP00746 253 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-212ENST00000569575 C1QBP02746 253 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 DEFA5Q01523 94 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 NHLH2Q02577 135 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 RPEL1Q2QD12 228 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 HAPLN4Q86UW8 402 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 TMEM217Q8N7C4 229 aa18.07■□□□□ 0.48
RAB40C-212ENST00000569575 UBAC2Q8NBM4 344 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms