RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	OR5I1	Q13606	314 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	ZNF79	Q15937	498 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	KDM4D	Q6B0I6	523 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	RPL22L1	Q6P5R6	122 aa	Known RBP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	ZNF600	Q6ZNG1	722 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	DEFB107A	Q8IZN7	70 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	CADM3	Q8N126	398 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	FAM89B	Q8N5H3	189 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	CIRBP-AS1	Q8TBR5	109 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	GLMP	Q8WWB7	406 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	SLC25A46	Q96AG3	418 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	LGALS12	Q96DT0	336 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	TMEM59	Q9BXS4	323 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	KRTAP4-7	Q9BYR0	210 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	DCSTAMP	Q9H295	470 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	SAV1	Q9H4B6	383 aa	Predicted RBP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	NDUFA4L2	Q9NRX3	87 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	RBMX2	Q9Y388	322 aa	Known RBP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440		A0A096LPF7	62 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	TMEM14DP	A8MWL7	114 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440		K7EP13	123 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	OGG1	O15527	345 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	ATP8B1	O43520	1251 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	GNG7	O60262	68 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	CDK1	P06493	297 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	AZU1	P20160	251 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	AP2S1	P53680	142 aa	Predicted RBP	4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	RPL37A	P61513	92 aa	Known RBP	4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	PSG9	Q00887	426 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	POU2AF1	Q16633	256 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440		Q499Y3	187 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	ACSM3	Q53FZ2	586 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	OR13F1	Q8NGS4	319 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	OR1P1	Q8NH06	330 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	CANT1	Q8WVQ1	401 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	TRUB1	Q8WWH5	349 aa	Known RBP	4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	METTL26	Q96S19	204 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	CMSS1	Q9BQ75	279 aa	Known RBP	4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	AIFM2	Q9BRQ8	373 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	LPAR5	Q9H1C0	372 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440	HRASLS	Q9HDD0	168 aa		4.11	□□□□□ -1.75
BBS4-218	ENST00000569440		A0A1W2PPK0	400 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	DENR	O43583	198 aa	Known RBP	4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	SLC22A5	O76082	557 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	MT-CO2	P00403	227 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	IGHV3-48	P01763	117 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	HLA-DQB1	P01920	261 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	CD36	P16671	472 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	HOXB6	P17509	224 aa	Known RBP	4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	EIF2B2	P49770	351 aa	Known RBP	4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	RASSF2	P50749	326 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	PPP5C	P53041	499 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	C16orf54	Q6UWD8	224 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	FOXI2	Q6ZQN5	318 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	LINC00612	Q8N6U2	182 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	NKAIN3	Q8N8D7	197 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	TCTEX1D2	Q8WW35	142 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	LSM10	Q969L4	123 aa	Known RBP	4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	MOB3A	Q96BX8	217 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	IGF2BP2-AS1	Q96M15	143 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	C8orf49	Q96NF6	230 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	HSD17B10	Q99714	261 aa	Known RBP	4.1	□□□□□ -1.75
BBS4-218	ENST00000569440	SLC29A1	Q99808	456 aa		4.1	□□□□□ -1.75
BBS4-218	ENST00000569440		A8MTW9	85 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	TMEM50A	O95807	157 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	IGLV2-11	P01706	119 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	LIMS3	P0CW19	117 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	LIMS4	P0CW20	117 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	TAS2R31	P59538	309 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	B2M	P61769	119 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	MRPS15	P82914	257 aa	Known RBP	4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	ASAH1	Q13510	395 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	PLAC9	Q5JTB6	97 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	C1orf100	Q5SVJ3	147 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	MEDAG	Q5VYS4	303 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	SPATA31B1P	Q5VZV4	182 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	TMED4	Q7Z7H5	227 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	OR4B1	Q8NGF8	309 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	OR1L8	Q8NGR8	309 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	OR10J6P	Q8NGY7	276 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	SMIM19	Q96E16	107 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	VSIG2	Q96IQ7	327 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	ARHGAP5-AS1	Q96IT6	56 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	ABHD1	Q96SE0	405 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	GINS4	Q9BRT9	223 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	TMEM208	Q9BTX3	173 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	PECR	Q9BY49	303 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	KCNK15	Q9H427	330 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	SCPEP1	Q9HB40	452 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	DNAJC4	Q9NNZ3	241 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	NRN1	Q9NPD7	142 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	SPATA2	Q9UM82	520 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	KCNK7	Q9Y2U2	307 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	LY96	Q9Y6Y9	160 aa		4.09	□□□□□ -1.75
BBS4-218	ENST00000569440	IGKV1D-13	A0A0B4J2D9	117 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	AQP12B	A6NM10	295 aa		4.08	□□□□□ -1.76
BBS4-218	ENST00000569440	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-218	ENST00000569440		J3QRK9	145 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms