RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ARL6IP6Q8N6S5 226 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 DEFB108BQ8NET1 73 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 H1FXQ92522 213 aaKnown RBP6.21□□□□□ -1.42
ATXN3-250ENST00000568290 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
ATXN3-250ENST00000568290 ATG101Q9BSB4 218 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 PPP1R14DQ9NXH3 145 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF492Q9P255 531 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 REV3LO60673 3130 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 CACNA1GO43497 2377 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF407Q9C0G0 2248 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 TRBV20OR9-2A0A075B6H5 130 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 TRBV6-1A0A0K0K1D8 114 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 K7EN84 100 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 SLC25A5P05141 298 aaKnown RBP6.2□□□□□ -1.42
ATXN3-250ENST00000568290 HBBP68871 147 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM136Q6ZRR5 245 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 DOLPP1Q86YN1 238 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM116Q8NCL8 245 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 C8orf46Q8TAG6 207 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 PLPPR2Q96GM1 343 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 MRPL20Q9BYC9 149 aaKnown RBP6.2□□□□□ -1.42
ATXN3-250ENST00000568290 TNFRSF19Q9NS68 423 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF355PQ9NSJ1 428 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM14CQ9P0S9 112 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 FAM215AQ9Y5M1 114 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 MED12LQ86YW9 2145 aa6.2□□□□□ -1.42
ATXN3-250ENST00000568290 A0A0C4DFX4 3053 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 AHCTF1Q8WYP5 2266 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 ESPL1Q14674 2120 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 A0A1B0GV90 55 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 DPRXA6NFQ7 191 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 SLC17A3O00476 420 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 FOXH1O75593 365 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 OR2J3O76001 311 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 TOMM40O96008 361 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 P01737 135 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 NBEAP1P0C6P0 100 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 LINC00614P0C842 121 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 SRIP30626 198 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 CHRNB4P30926 498 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 APOBEC3AP31941 199 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-250ENST00000568290 MFAP2P55001 183 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 KRTDAPP60985 99 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 SPATA31B1PQ5VZV4 182 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 SEM1Q6ZVN7 128 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 LINC00305Q7Z4B0 112 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM256Q8N2U0 113 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 FAM216BQ8N7L0 139 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 OR4F17Q8NGA8 305 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 OR2D3Q8NGH3 330 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 NPIPB3Q92617 1050 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 TIMD4Q96H15 378 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 IGF2BP2-AS1Q96M15 143 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 TXN2Q99757 166 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 SCNM1Q9BWG6 230 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 SLC25A2Q9BXI2 301 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 RAB1BQ9H0U4 201 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM133Q9H2Q1 129 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 NRN1Q9NPD7 142 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 OTORQ9NRC9 128 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 THYN1Q9P016 225 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 RALYQ9UKM9 306 aaKnown RBP6.19□□□□□ -1.42
ATXN3-250ENST00000568290 HIGD1AQ9Y241 93 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 ZFP30Q9Y2G7 519 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 POLR3KQ9Y2Y1 108 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-250ENST00000568290 KLF12Q9Y4X4 402 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 INSIG2Q9Y5U4 225 aa6.19□□□□□ -1.42
ATXN3-250ENST00000568290 SPAARA0A1B0GVQ0 90 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 GRIFINA4D1Z8 144 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 GGTLC3B5MD39 225 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 CHEK1O14757 476 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 ENSAO43768 121 aaKnown RBP6.18□□□□□ -1.42
ATXN3-250ENST00000568290 IGHV3-7P01780 117 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 IGKV1-16P04430 117 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 CD3EP07766 207 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 IGHV1-8P0DP01 117 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 SELLP14151 372 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 BTF3P20290 206 aaKnown RBP6.18□□□□□ -1.42
ATXN3-250ENST00000568290 HNF1AP20823 631 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 CSN1S1P47710 185 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 TDGF1P3P51864 188 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
ATXN3-250ENST00000568290 LINC00205P59089 165 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 CCL8P80075 99 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 RIGQ13278 110 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 ADIPOQQ15848 244 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM155Q4W5P6 130 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 TPTE2P1Q5T6R2 138 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM200BQ69YZ2 307 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 PVRIGQ6DKI7 326 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 GFRALQ6UXV0 394 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 RBPMS2Q6ZRY4 209 aaKnown RBP6.18□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF329Q86UD4 541 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 BPIFA4PQ86YQ2 179 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 VN1R17PQ8TDU5 208 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 RND1Q92730 232 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 MISP3Q96FF7 219 aa6.18□□□□□ -1.42
ATXN3-250ENST00000568290 RASL11BQ9BPW5 248 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms