RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 C5orf64Q2M2E5 130 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 Q8N6K4 173 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
COMMD4-221ENST00000567935 C22orf15Q8WYQ4 148 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 TMEM231Q9H6L2 316 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 PXMP4Q9Y6I8 212 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 MGAM2Q2M2H8 2515 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 TRAV20A0A0B4J274 112 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 A0A1W2PPV4 95 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 B4DSR2 109 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 E7EUB6 86 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 SNAPINO95295 136 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 SAA4P35542 130 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 CDC34P49427 236 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-221ENST00000567935 B2MP61769 119 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 GAMTQ14353 236 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 LCN15Q6UWW0 184 aa11.63□□□□□ -0.55
COMMD4-221ENST00000567935 LOC102723971A0A1B0GUV8 181 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 A0A1W2PRD5 423 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 A0A1W2PRF3 423 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 A0A1W2PRM7 423 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 CNIH1O95406 144 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 BCL2P10415 239 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 TMEM11P17152 192 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 ADCYAP1P18509 176 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 SELENOTP62341 195 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 GNB1P62873 340 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 CCL20P78556 96 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 PRR20EP86478 221 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 PRR20CP86479 221 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 PRR20DP86480 221 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 PRR20BP86481 221 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 PRR20AP86496 221 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 DEFA5Q01523 94 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 FAM122CQ6P4D5 195 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 ZNF562Q6V9R5 426 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 RAB24Q969Q5 203 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 MANBALQ9NQG1 85 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 SLC45A2Q9UMX9 530 aa11.62□□□□□ -0.55
COMMD4-221ENST00000567935 F11RQ9Y624 299 aaKnown RBP11.62□□□□□ -0.55
COMMD4-221ENST00000567935 IGHV1-69DA0A0B4J2H0 117 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 CENPVL3A0A0U1RRI6 287 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 A0A1B0GV50 99 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 MT-CO2P00403 227 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 IGHV1-69P01742 117 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 CRYGCP07315 174 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 PSMB3P49720 205 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 RHOBP62745 196 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 HNF4GQ14541 408 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 STPG3Q8N7X2 389 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 THAP8Q8NA92 274 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 NANPQ8TBE9 248 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 RNF2Q99496 336 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 SLC25A22Q9H936 323 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 GNG13Q9P2W3 67 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 VAX2Q9UIW0 290 aa11.61□□□□□ -0.55
COMMD4-221ENST00000567935 PRKDCP78527 4128 aaKnown RBP11.61□□□□□ -0.55
COMMD4-221ENST00000567935 TRRAPQ9Y4A5 3859 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 YIF1AO95070 293 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 SSBP2P81877 361 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-221ENST00000567935 ICAM4Q14773 271 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 FXYD3Q14802 87 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 HAGHQ16775 308 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 MIC13Q5XKP0 118 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 HIST2H2BDQ6DRA6 164 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 C12orf54Q6X4T0 127 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 ABHD5Q8WTS1 349 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 AJUBAQ96IF1 538 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 NKX6-2Q9C056 277 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-221ENST00000567935 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
COMMD4-221ENST00000567935 C9JQL5 133 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 J3QLI3 93 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 FCN1O00602 326 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 AREGP15514 252 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 OR10J1P30954 320 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 SOHLH1Q5JUK2 328 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 CYP2G1PQ6ZSU1 146 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 SSX7Q7RTT5 188 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 SSMEM1Q8WWF3 244 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 TXNDC17Q9BRA2 123 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
COMMD4-221ENST00000567935 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.56
COMMD4-221ENST00000567935 NPIPB5A8MRT5 1133 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 CXorf1O96002 111 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 HLA-DRB1P01911 266 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 SRP19P09132 144 aaKnown RBP11.58□□□□□ -0.56
COMMD4-221ENST00000567935 FBP1P09467 338 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 LINC00869P0C866 280 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 CTRB1P17538 263 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-221ENST00000567935 BPIFB3P59826 476 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 LOXL1Q08397 574 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-221ENST00000567935 CTRB2Q6GPI1 263 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 IL17RELQ6ZVW7 336 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 LINC01356Q8N9X3 169 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 TMEM116Q8NCL8 245 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms