RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 INTS1Q8N201 2190 aaKnown RBP10.34□□□□□ -0.75
CSPG4P13-202ENST00000567704 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
CSPG4P13-202ENST00000567704 A0A1W2PR77 199 aa10.34□□□□□ -0.75
CSPG4P13-202ENST00000567704 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
CSPG4P13-202ENST00000567704 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
CSPG4P13-202ENST00000567704 S4R3C0 116 aa10.34□□□□□ -0.75
CSPG4P13-202ENST00000567704 MYLKQ15746 1914 aa10.34□□□□□ -0.75
CSPG4P13-202ENST00000567704 HBDP02042 147 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 MAFAQ8NHW3 353 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 VWCEQ96DN2 955 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 RAB1BQ9H0U4 201 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 CACNA1GO43497 2377 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 C9JCJ5 164 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 TMEM50AO95807 157 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 ZNF479Q96JC4 524 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 C15orf61A6NNL5 157 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 C16orf97H3BN30 126 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 J3QW42 95 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 FOXH1O75593 365 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 LEPP41159 167 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 CLEC7AQ9BXN2 247 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 A0A1B0GW15 77 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 CFPP27918 469 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 MEF2CQ06413 473 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 PSMG4Q5JS54 123 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 FAM53AQ6NSI3 398 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 DNM1P46Q6ZS02 220 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 FER1L5A0AVI2 2057 aa10.33□□□□□ -0.76
CSPG4P13-202ENST00000567704 CNOT1A5YKK6 2376 aaKnown RBP10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 PLAURQ03405 335 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 SPEM2Q0P670 501 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 OCIAD2Q56VL3 154 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 PNRC2Q9NPJ4 139 aaKnown RBP10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 GUSBP1Q15486 140 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 Q6AWC8 147 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 CIARTQ8N365 385 aaPredicted RBP10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 COQ2Q96H96 371 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 ANAPC13Q9BS18 74 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 SHANK1Q9Y566 2161 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 TSPAN13O95857 204 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 CELA3BP08861 270 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 SELLP14151 372 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 NRN1LQ496H8 165 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 FER1L6-AS1Q8NA97 138 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 NABP1Q96AH0 204 aa10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 MRPS16Q9Y3D3 137 aaKnown RBP10.32□□□□□ -0.76
CSPG4P13-202ENST00000567704 ZNF585BQ52M93 769 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 PMS2CLQ68D20 193 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 MGST2Q99735 147 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 DOCK10Q96BY6 2186 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 A0A1W2PS18 150 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 PRR33A8MZF0 331 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 UPK2O00526 184 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 SAA1P0DJI8 122 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 CCDC144NLQ6NUI1 221 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 Q6ZWC4 215 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 FAM216BQ8N7L0 139 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 SPTBN2O15020 2390 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 KBTBD11-OT1A0A1B0GTJ5 212 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 M0R381 172 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 PRSS8Q16651 343 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 SAA2-SAA4A0A096LPE2 208 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 SAA2P0DJI9 122 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 ZNF138P52744 262 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 CD69Q07108 199 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 KLRB1Q12918 225 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 MORN2Q502X0 79 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 ATP5L2Q7Z4Y8 100 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 TEX29Q8N6K0 151 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 ZIC4Q8N9L1 334 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 METTL26Q96S19 204 aa10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 MRPL20Q9BYC9 149 aaKnown RBP10.31□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGLC2P0DOY2 106 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 ESDP10768 282 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 HEATR5AQ86XA9 2040 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGKV3D-15A0A087WSY6 115 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGKV3-15P01624 115 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 FOXF2Q12947 444 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 SRSF7Q16629 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 PPP1R32Q7Z5V6 425 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 LHFPL4Q7Z7J7 247 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 BCL6BQ8N143 479 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 C10orf126Q8N4M7 172 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 KIR2DL4Q99706 377 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms