RNA–Protein interactions for RNA: ENST00000567205.1

FANCA-222, Transcript of FA complementation group A, human

TSL 1 (best)

Gene FANCA, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-222	ENST00000567205	RPP30	P78346	268 aa	Known RBP	12.45	□□□□□ -0.42
FANCA-222	ENST00000567205	IL34	Q6ZMJ4	242 aa		12.45	□□□□□ -0.42
FANCA-222	ENST00000567205	ENKUR	Q8TC29	256 aa		12.45	□□□□□ -0.42
FANCA-222	ENST00000567205	DAZ1	Q9NQZ3	744 aa	Known RBP	12.45	□□□□□ -0.42
FANCA-222	ENST00000567205	FLVCR2	Q9UPI3	526 aa		12.45	□□□□□ -0.42
FANCA-222	ENST00000567205	TRAV30	A0A087WSZ9	112 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	PITX3	O75364	302 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	IFNA10	P01566	189 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	HOXB5	P09067	269 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	FOLR2	P14207	255 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	ANXA7	P20073	488 aa	Known RBP	12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	BMI1	P35226	326 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	GGNBP1	Q5YKI7	109 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	GTSCR1	Q86UQ5	136 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	MITD1	Q8WV92	249 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	PRR25	Q96S07	402 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	GINS3	Q9BRX5	216 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	RBKS	Q9H477	322 aa		12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	MRPL27	Q9P0M9	148 aa	Known RBP	12.44	□□□□□ -0.42
FANCA-222	ENST00000567205	TMEM213	A2RRL7	107 aa		12.43	□□□□□ -0.42
FANCA-222	ENST00000567205		F8W735	103 aa	Predicted RBP	12.43	□□□□□ -0.42
FANCA-222	ENST00000567205	NXPH3	O95157	252 aa		12.43	□□□□□ -0.42
FANCA-222	ENST00000567205	CTSG	P08311	255 aa		12.43	□□□□□ -0.42
FANCA-222	ENST00000567205	DEFB121	Q5J5C9	76 aa		12.43	□□□□□ -0.42
FANCA-222	ENST00000567205	ZC4H2	Q9NQZ6	224 aa		12.43	□□□□□ -0.42
FANCA-222	ENST00000567205	TBC1D24	Q9ULP9	559 aa		12.43	□□□□□ -0.42
FANCA-222	ENST00000567205	TRAV6	A0A075B6T7	132 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	C15orf62	A8K5M9	175 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205		K7EMT4	169 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	WRB	O00258	174 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	CLN5	O75503	358 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	H2AFB2	P0C5Z0	115 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	CBLN1	P23435	193 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	ADM	P35318	185 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	RAB11A	P62491	216 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	OR4X1	Q8NH49	305 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	CHRDL1	Q9BU40	450 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	SMAD5-AS1	Q9Y6J3	95 aa		12.42	□□□□□ -0.42
FANCA-222	ENST00000567205	TRAV25	A0A0B4J276	109 aa		12.41	□□□□□ -0.42
FANCA-222	ENST00000567205	SYNGR2	O43760	224 aa		12.41	□□□□□ -0.42
FANCA-222	ENST00000567205	UNQ9165/PRO28630	Q6UXU0	137 aa		12.41	□□□□□ -0.42
FANCA-222	ENST00000567205	ZNF600	Q6ZNG1	722 aa		12.41	□□□□□ -0.42
FANCA-222	ENST00000567205	C20orf24	Q9BUV8	137 aa		12.41	□□□□□ -0.42
FANCA-222	ENST00000567205	IGHV3-35	A0A0C4DH35	117 aa		12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	IFNA4	P05014	189 aa		12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	C8orf88	P0DMB2	117 aa		12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	DEFB114	Q30KQ6	69 aa		12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	UXS1	Q8NBZ7	420 aa		12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	TMEM116	Q8NCL8	245 aa		12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	OR1S2	Q8NGQ3	325 aa		12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	ZNF431	Q8TF32	576 aa	Predicted RBP	12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	GPN1	Q9HCN4	374 aa	Predicted RBP	12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	LSM4	Q9Y4Z0	139 aa	Known RBP	12.4	□□□□□ -0.42
FANCA-222	ENST00000567205	PRAF2	O60831	178 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	ADAP1	O75689	374 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	YIF1A	O95070	293 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	IGHV3-48	P01763	117 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	CD5	P06127	495 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	NKX2-1	P43699	371 aa	Predicted RBP	12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	CD300E	Q496F6	205 aa	Predicted RBP	12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	HAPLN4	Q86UW8	402 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	SLC35E1	Q96K37	410 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	OR10C1	Q96KK4	312 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	B9D2	Q9BPU9	175 aa		12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.39	□□□□□ -0.43
FANCA-222	ENST00000567205	TMEM50A	O95807	157 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	GPX4	P36969	197 aa	Predicted RBP	12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	RND2	P52198	227 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	CD69	Q07108	199 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	IAH1	Q2TAA2	248 aa	Predicted RBP	12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	TM4SF20	Q53R12	229 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	LAMTOR1	Q6IAA8	161 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	SLC16A13	Q7RTY0	426 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	CACNG8	Q8WXS5	425 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	NARS2	Q96I59	477 aa	Known RBP	12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	TMEM231	Q9H6L2	316 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	COL7A1	Q02388	2944 aa		12.38	□□□□□ -0.43
FANCA-222	ENST00000567205	IL5	P05113	134 aa		12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	FABP1	P07148	127 aa		12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	IAPP	P10997	89 aa		12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	PRSS54	Q6PEW0	395 aa		12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	BTNL8	Q6UX41	500 aa		12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	ADAMTSL5	Q6ZMM2	481 aa		12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	OR52B4	Q8NGK2	314 aa		12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	STRAP	Q9Y3F4	350 aa	Known RBP	12.37	□□□□□ -0.43
FANCA-222	ENST00000567205	OR10J1	P30954	320 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	YPEL3	P61236	119 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	ID3	Q02535	119 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	GUCA2B	Q16661	112 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	C11orf87	Q6NUJ2	197 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	TMEM61	Q8N0U2	210 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	OR4D5	Q8NGN0	318 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	TMEM170A	Q8WVE7	144 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	RAB40C	Q96S21	281 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	SPAG8	Q99932	426 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	MLX	Q9UH92	298 aa		12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	PUS1	Q9Y606	427 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
FANCA-222	ENST00000567205	TRAV14DV4	A0A0A6YYC5	116 aa		12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms